Flavobacterium columnare: FCOL_11680
Help
Entry
FCOL_11680 CDS
T01653
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fco
Flavobacterium columnare
Pathway
fco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FCOL_11680 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fco03019
]
FCOL_11680 (groEL)
03110 Chaperones and folding catalysts [BR:
fco03110
]
FCOL_11680 (groEL)
03029 Mitochondrial biogenesis [BR:
fco03029
]
FCOL_11680 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fco04147
]
FCOL_11680 (groEL)
Enzymes [BR:
fco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FCOL_11680 (groEL)
Messenger RNA biogenesis [BR:
fco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FCOL_11680 (groEL)
Chaperones and folding catalysts [BR:
fco03110
]
Heat shock proteins
HSP60 / Chaperonin
FCOL_11680 (groEL)
Mitochondrial biogenesis [BR:
fco03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FCOL_11680 (groEL)
Exosome [BR:
fco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FCOL_11680 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
FCOL_11680 (groEL)
Exosomal proteins of breast cancer cells
FCOL_11680 (groEL)
Exosomal proteins of colorectal cancer cells
FCOL_11680 (groEL)
Exosomal proteins of bladder cancer cells
FCOL_11680 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
KH_PARP14_2
NNH2
Motif
Other DBs
NCBI-ProteinID:
AEW87137
UniProt:
G8X823
LinkDB
All DBs
Position
2767726..2769357
Genome browser
AA seq
543 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIISKSFGAPHVTKDGVSVAKEVE
LKDTLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVADLGKQAKEVGSSTDKIKQVASISANNDEVIGDLIATAFGKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTNTEKMEVELERPYILLYDKKVSSLKELLPILEPV
AQSSKPLLIIAEDVDGEALSTLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEESGYTLENATLEMLGTAEKVSIDKDNTTIVNGAGENEMIKNRVNQIKAQMESTTSDY
DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
RAKAVLANIKAENGDEATGIQIVSRAIEAPLRTIVENAGLEGSVIVAKVAEGKENFGYNA
KTDEYVDMLEAGIIDPKKVTRVALENAASVSGMILTTECALIDIKEEAPAGGMPMGGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcacgtgacggattaaaacgcggtgtagac
gcattagcaaacgcagtaaaagtgacattaggacctaaaggacgtaacgtaatcatttcg
aaatcgtttggggctcctcacgtaactaaagacggggtttctgtggctaaagaagtagaa
ttgaaagacactcttgaaaacatgggggcgcaaatggtaaaagaagtagcttctaaaacc
aatgatttagcgggtgacggtactactactgctaccgtattagcacaagctatcgttaaa
gaaggtttgaaaaacgtagctgcgggtgctaaccctatggacttaaaacgtggtatcgac
aaagcggttgaggctatcgttgcggatttaggcaaacaagcaaaagaagtgggctcttct
actgataaaatcaaacaagtagcttctatttcggctaataacgatgaagtgattggtgat
ttaattgcgaccgcttttggtaaagtgggtaaagaaggggtaattactgtggaagaagct
aaaggtactgatacttatgtagatgtagtagagggaatgcagtttgacagagggtattta
tcgccttactttgtaaccaatacagaaaaaatggaggttgaattagaaagaccttacatt
ttattatacgacaaaaaagtatcttctttaaaagaattattacccattttagagcctgtt
gcgcaatcttcaaaaccgttattaatcattgcggaagatgtagatggagaagctttatct
actttggttgtaaacaaattgcgtggcgctttaaaaattgctgcggtaaaagcacctggt
tttggtgaccgtagaaaagccatgttagaagatattgctatcttaactggaggtactgta
atttcagaagaaagcggatatactttagaaaacgctactttagaaatgttaggaactgct
gaaaaagtatctatcgataaagacaatacaacgattgtaaacggtgcgggtgagaacgaa
atgattaaaaatcgtgtaaaccaaatcaaagcgcaaatggagtcaacgacttctgactac
gaccgtgagaaattacaagaacgtttggctaaattagcaggtggtgtagcggtattgtac
gtgggtgctgcttctgaagtagaaatgaaagagaaaaaagaccgtgtggatgatgcctta
catgcaactcgtgctgcggtggaagaaggtattgtagctggtggtggtgtggctttatta
agagccaaagcggttttagctaacatcaaagctgaaaatggtgatgaagctacaggaatt
caaattgtttctcgtgctattgaagcgccattacgcactatcgttgaaaatgctggctta
gaaggttcagtaattgtagctaaagtggcggaaggcaaagaaaactttggatacaacgct
aaaacggacgagtatgtagacatgctggaagcaggaatcattgaccctaaaaaagtaaca
cgtgtagctttagaaaacgcggcttcggtttcaggaatgattttaacaaccgagtgtgct
ttaattgacattaaggaagaagctcctgctggtggtatgccaatgggtggcggtatgccg
ggaatgatgtaa
DBGET
integrated database retrieval system
