Flavobacterium columnare: FCOL_12270
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Entry
FCOL_12270 CDS
T01653
Name
(GenBank) DNA mismatch repair protein MutL
KO
K03572
DNA mismatch repair protein MutL
Organism
fco
Flavobacterium columnare
Pathway
fco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FCOL_12270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fco03400
]
FCOL_12270
DNA repair and recombination proteins [BR:
fco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
FCOL_12270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AEW87255
UniProt:
G8X9Q7
LinkDB
All DBs
Position
complement(2890783..2892660)
Genome browser
AA seq
625 aa
AA seq
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MSSIIQLLPDHVANQIAAGEVVQRPASVVKELVENAIDAGSTDIKLICKDAGKTLIQVID
NGKGMSVTDARLCFERHATSKIRKAEDLFDLHTKGFRGEALASIAAIAHVELKTKQDQEE
LGTHLIIEGSKFVSQEPSVLPKGTSFAIKNLFFNIPARRNFLKSDTVELRHIIDDFQRVA
LAHENIHFTFYHNGSEVFNLPQSNLRQRIVNIFAGKTNEKLVPVTEDTEIVRLKGFIGKP
EFAKKNRGEQFFFVNDRFIKSGYLHHAIMAAYEGLLKEGMQPSYFLYLDVPPHTIDINIH
PTKTEIKFDDEQALYAIIRSAVKHSLGQFNVAPILDFDRDANLDTPYSYVGKDAEMPTIQ
VDATFNPFAEEAPAPKKESTGLGSFSSGSSLNYQPKKESQSWESLYVGLKDAFEPEEIHF
ESESVTGSLFNDTEIEKAKSITYQLQKKYIISPIKSGMLIVDQQRAHQRILYEQLLKNIT
VQQANSQQLLFPLTLYFSGIEMALFLELKASLENAGFIFESAASGSVVISGIPVTMLESE
VARVLEQLIADLQEEIPDSSFSQMDSMAKSMARSLAVKTGTFLTELEQENIVNNLFACKE
QSVSPFNRPTFITLSVEDIDKKFSI
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtataatacaattactacccgatcatgtagctaaccaaatagcggctggagag
gtagtacaaagacctgcttcggtagtcaaagaattggtggaaaacgcaattgatgcggga
tcaactgatattaagcttatttgtaaagatgcgggtaaaacactcatacaagttattgat
aatggtaagggaatgagtgtaacagatgcacgtctttgttttgaacgtcatgctacgtca
aaaattagaaaagcagaggatttgtttgatttacatacaaaaggttttcgaggagaagct
ttagcttctatagccgcaatagcacatgtagaactcaagacgaaacaagatcaagaggaa
ctaggaacgcatttaattatagaagggagtaagtttgtttctcaagagccatccgtgttg
cctaaagggacctcttttgctattaaaaatttgttttttaacataccagctcgtagaaac
tttttaaaatcagataccgttgaattgcgtcatataatagatgattttcaaagggtagct
ttagcgcacgaaaatatacattttacgttttatcataacggaagtgaagtgtttaatttg
cctcaatctaatttgcgccaacgcattgttaatatctttgctggtaaaaccaatgaaaag
ttagtgcctgtaaccgaagatactgaaattgtaaggttgaaaggctttataggaaaacct
gaatttgctaaaaaaaatagaggagaacagtttttttttgtaaatgatcgttttattaaa
agtggttatttgcatcatgctattatggctgcttacgaaggtttgttgaaagaagggatg
caacccagttattttctttatttagatgttcctcctcataccattgatattaacattcac
ccaactaaaacagaaataaagtttgatgatgaacaagctttgtatgctattatccgttcg
gctgtaaaacatagtttgggacagtttaatgtagctcctattttagattttgatcgcgat
gcaaaccttgatacaccttatagttatgttggaaaagacgcagaaatgcctaccatacag
gtagatgcaacttttaatccttttgcagaagaggcaccagctcctaaaaaggaatctaca
ggtttgggttctttttcaagtggtagtagtttgaattatcaacctaaaaaagaaagccaa
agttgggaaagcctttatgtaggactaaaagacgcatttgaacccgaagaaatacatttt
gaatcagaatcagttacaggatctttatttaatgatacagaaatagaaaaagcaaaatct
ataacctatcagttacaaaaaaaatatataataagtcctataaaatcaggaatgttgatt
gtagatcaacaacgagctcatcaacgtattttatatgagcaattgttaaagaatataacg
gttcaacaagcaaatagtcaacagttgttgtttccattgaccttgtatttttcaggaata
gaaatggcattgtttttagaattaaaggcttcgttagaaaatgctggatttatttttgaa
tcagctgcttcgggctcagttgtaatatcaggaattcctgttacgatgttagaaagtgaa
gtagctagggttttagaacagttaatagcagatttgcaagaagaaatacccgatagtagt
tttagtcaaatggatagcatggctaaatctatggcaagaagtttagctgttaaaacagga
acttttttaaccgaattagaacaagagaatatagttaataacctttttgcatgtaaagag
caatcggtttcaccatttaatcgccctacctttattacactgagtgtggaagatatagac
aaaaagtttagtatatga
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