Flavobacterium columnare: FCOL_12515
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Entry
FCOL_12515 CDS
T01653
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fco
Flavobacterium columnare
Pathway
fco00300
Lysine biosynthesis
fco00470
D-Amino acid metabolism
fco01100
Metabolic pathways
fco01110
Biosynthesis of secondary metabolites
fco01120
Microbial metabolism in diverse environments
fco01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FCOL_12515
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FCOL_12515
Enzymes [BR:
fco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FCOL_12515
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Orn_DAP_Arg_deC
S1-P1_nuclease
Motif
Other DBs
NCBI-ProteinID:
AEW87302
UniProt:
G8X9V4
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All DBs
Position
2934007..2935245
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AA seq
412 aa
AA seq
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MKKRNKVFQQILEQDKAAFVIDEAKFADNIQKMQKAFLDHYPNITIGYSYKTNYIPKVCH
IAHENECWAEVVSEMEVEMAQLNLNNKANIIYNGPVKSIDSLQTVIDAEGIINIDNDSDL
EKINTILISTSKKAKVALRLSFDFQDNTSRFGLEMAKVLELEKKLLADPRYIVLGFHLHL
PFRSLESFQFRVECMLKVLSASANKNLDYINLGGGFFGDIPHDVAKVLGISKLPSFDDYA
KVLGGELKKYFLNLGVMPSQMPRLFIEPGSSVIADGMYYISKIHAKKTIQGRNYLITYAG
RHLLSPTNKTIDLPLELGERENTKVENNAKLDALVVGYTCIEGDVLGKIEISNEIEIENA
YIIVKNVGSYSIVMGSDFILPQPAIYSFDVDFNLSKIRSTKKAIEVYNSFIE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaaataaagtttttcaacaaatcttagaacaagataaagcggcctttgta
attgatgaagcaaagtttgcagataatattcaaaaaatgcaaaaggcttttttggatcat
tatccgaatataactattggatattcttataaaactaattatattcctaaagtatgtcat
attgcacatgagaatgaatgctgggctgaagtcgtttctgagatggaagttgaaatggct
caattgaatctaaacaacaaagctaatattatttataatggacctgttaaatcaatagat
tcgcttcaaactgtgattgatgcagaggggataataaatattgataatgattcagatctt
gaaaagattaataccatccttatttctacttctaaaaaagccaaagtagctttaagatta
agttttgattttcaggataacacttctcgttttggacttgaaatggcaaaagttttagag
ttggaaaagaaactcttagcagatcctagatatatcgttttagggttccatctacatttg
cctttcagaagtttagagtcatttcagtttcgtgtagagtgtatgctaaaagtattgagc
gcttcagctaataaaaatctcgattatattaatttaggaggaggtttttttggagatatt
cctcatgatgtggctaaagttctaggaatttctaagctgcctagttttgatgattatgct
aaagttctaggaggcgaactgaaaaaatattttttaaatttaggagtaatgccatctcaa
atgccaaggttgtttattgagccaggtagttctgttattgctgatggcatgtattatata
tctaaaatacatgccaaaaaaacaattcaaggaaggaattatttgattacttatgcaggt
agacatttgttaagtcccacaaataaaactatagatctcccacttgaattaggtgaaaga
gaaaatactaaagtagaaaacaatgcgaaattggatgctttagttgtggggtatacttgt
atcgaaggtgatgtgttagggaaaatcgaaatatcaaatgaaatcgaaatagagaatgct
tatataattgttaaaaatgtaggaagctattctatagttatgggtagtgatttcattttg
ccacaaccagctatttatagttttgatgttgattttaatttaagtaaaatcagatcaact
aaaaaagctatagaggtatataatagtttcattgaataa
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