Flavobacterium columnare: FCOL_13125
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Entry
FCOL_13125 CDS
T01653
Name
(GenBank) Cys/Met metabolism PLP-dependent enzyme
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
fco
Flavobacterium columnare
Pathway
fco00260
Glycine, serine and threonine metabolism
fco00270
Cysteine and methionine metabolism
fco00450
Selenocompound metabolism
fco00670
One carbon pool by folate
fco01100
Metabolic pathways
fco01110
Biosynthesis of secondary metabolites
fco01230
Biosynthesis of amino acids
Module
fco_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FCOL_13125
00270 Cysteine and methionine metabolism
FCOL_13125
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FCOL_13125
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FCOL_13125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fco04147
]
FCOL_13125
Enzymes [BR:
fco01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
FCOL_13125
Exosome [BR:
fco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FCOL_13125
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
Met_gamma_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AEW87420
UniProt:
G8XBK5
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All DBs
Position
3068799..3069947
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AA seq
382 aa
AA seq
DB search
MKFNTKTIHGGQQHDPSTGAVMPPVYNTSTFAQHDPGVPNNGYEYSRAANPTRTALENAL
ASIENGTRGLAFSSGLAATDCVLRGLKAGDEVIAMDDLYGGTYRMFTRIYKESGIKFHFV
DMNDLPKFESLINENTRLVWVETPTNPLMKLADIKAVAGIIKKYSNILFAVDNTFATPYL
QKPLDLGADIVMHSATKYLGGHSDVIAGALIVKDEALGNQLHFQQFATGATLGPNDSFLV
LRGIKTLHLRVQRHCENGVKVAEFLVNHPKVEKVYYPGLENHPFHEVAKKQMIGGFGGMV
TFTFKSGAKQDAVDFLKKLKVFTLAESLGGVESLANHPALMTHASIPEDKRKEIGISDDL
VRLSVGVEDIQDLIEDLQQALA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaatacaaaaaccatacatggtggtcaacaacatgaccccagtacaggggct
gttatgcctcctgtttataatacctctacttttgcacaacatgatccaggtgttccaaat
aacggatatgaatacagtagagcagcaaatcctactcgtacagccttagaaaatgctttg
gcaagtatagaaaacggaacacgtggattagctttttcttctggtttagcagctactgac
tgtgttttaagagggttaaaagcaggagatgaagtaattgctatggatgatttatacggt
ggaacctatcgtatgtttacccgtatttataaagagtcaggtatcaagtttcattttgta
gatatgaatgatctaccaaaattcgaatcattaattaatgaaaatactcgtttagtttgg
gtagaaacgcctactaatccattaatgaaattagctgatattaaggctgttgcaggtata
attaaaaagtattctaatattctttttgctgttgataatacatttgcaacaccttatttg
caaaagccactcgatttaggagcggatatcgtaatgcattcagctactaaatatctagga
gggcattctgatgtaattgctggagctttgatcgtaaaagatgaagcgttaggaaaccaa
ttgcattttcaacaatttgctacaggagctactttaggccccaatgattcatttttagtt
ttaagaggaattaaaacattgcatttgcgcgttcaacgtcactgtgaaaatggggttaaa
gttgctgaatttttagtaaatcatcccaaagttgaaaaagtatattatccaggtttagaa
aaccatccttttcatgaagtagcaaaaaaacaaatgataggaggctttggaggaatggta
acttttacattcaaatcaggcgctaagcaagatgctgttgatttcttaaagaaattaaaa
gtgtttactttggcagaatctttaggaggtgtagaatcattggccaatcatccagctctc
atgacacacgcttcaataccagaagataaaagaaaagaaataggtatatcagacgattta
gtacgtttgagtgtgggtgttgaagatattcaagatttgatagaagatttgcaacaagca
ttagcctaa
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