Flavobacterium columnare: FCOL_13390
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Entry
FCOL_13390 CDS
T01653
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fco
Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fco03400
]
FCOL_13390
DNA repair and recombination proteins [BR:
fco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FCOL_13390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Zn_ribbon_LapB
DUF7125
Lon_C
AAA
AAA_22
AAA_24
AAA_5
CobU
NTPase_1
AAA_14
AAA_16
ABC_tran
AAA_18
nSTAND_NTPase5
RsgA_GTPase
Isochorismatase
NACHT
Rad51
DZR
SLFN-g3_helicase
TniB
Motif
Other DBs
NCBI-ProteinID:
AEW87473
UniProt:
G8XBQ8
LinkDB
All DBs
Position
complement(3123393..3124754)
Genome browser
AA seq
453 aa
AA seq
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MAKIKTSFFCQSCGSQFAKWQGQCTSCKEWNTLVEEIVQKEEKVTWKTESPTHKRAPKPL
LVHEIDSTEEIRMNTTDGELNRVLGGGLVPGSLTLLGGEPGIGKSTLLLQISLKLPYKTL
YVSGEESQKQIKMRAERITTKNDNCYILTETKTQNIFRQIETIEPDVVIIDSIQTLQTDY
IESSAGSISQIKECTAELIKFAKETNTPVILIGHITKDGTIAGPKILEHMVDTVLQFEGD
RNHIYRILRSLKNRFGSTSELGIYEMLGSGLREVSNPSEILISHKDEELSGTAIATTMEG
MRPLMIEIQALVSTAVYGTPQRSTTGYNAKRLNMILAVLEKRAGFRLGSKDVFLNITGGI
TVDDPAIDLAVVAAILSSNEDIPVGKDMCFAGEVGLSGEIRPVNRIDQRIQEAEKLGFST
IFVSKYSKISLKNHQITVKLVAKIEDVISELFG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaataaaaacctcttttttttgtcaaagctgcggcagtcagtttgctaaatgg
caaggacagtgtacctcttgtaaagaatggaatactctagttgaagaaatagttcaaaaa
gaagaaaaagtgacttggaaaaccgagtctcctactcataaaagagctccaaagcccctt
ttagttcatgaaattgattctacggaagaaatccgaatgaacacaactgatggagaatta
aaccgcgttttaggtggcggattagttccaggttcactaaccttattaggaggtgaacct
ggcattggaaagagtactttattgcttcaaatatctcttaagttaccttataaaacgcta
tatgtttcaggtgaagaaagccagaaacaaataaaaatgcgagcagaacgaattactacc
aaaaatgataactgttatatattaacagaaaccaaaactcaaaacatttttagacaaatt
gaaacgattgaacccgatgtggttataatagattccatacaaactttacaaacggattat
atagaatcctcagcaggcagtatttctcaaattaaagaatgtacggcagagcttattaaa
tttgctaaagaaaccaatacccctgtcattctaattggtcatataacaaaggatggcacc
attgcaggaccaaagatcttagaacacatggtagataccgtattgcagtttgaaggagat
cgaaatcatatttatcgcattttacgatcgctcaaaaaccgttttggttctacatccgaa
ttgggtatttatgaaatgcttggatcaggacttagagaggttagtaatccttctgaaata
ctaatatctcataaggatgaagaattatcaggcaccgctatagccacaaccatggaaggt
atgcgccctctaatgattgaaatacaagcactcgtttctacagccgtatatggaacacct
caaagaagcactacgggttataatgccaaaagactcaatatgatacttgctgttttagaa
aaaagagcaggcttccgattagggtctaaagacgtttttttaaatattacaggcgggatt
acagtagatgatccagccattgacctagcagttgtagccgccatactttcttctaacgaa
gatattcccgtaggaaaagatatgtgttttgcaggcgaagtaggattatcaggagaaata
cgccccgttaatagaattgatcaacgaatacaagaagcggaaaaacttggtttttcaacc
atatttgtatctaaatatagcaaaatatcattgaaaaatcatcaaataacagtaaaacta
gttgccaaaattgaagatgtaatcagtgaattatttggataa
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