KEGG   Flavobacterium columnare: FCOL_13390
Entry
FCOL_13390        CDS       T01653                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
fco  Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:fco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fco03400]
    FCOL_13390
DNA repair and recombination proteins [BR:fco03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     FCOL_13390
SSDB
Motif
Pfam: AAA_25 ATPase ChlI DnaB_C Zn_ribbon_LapB Lon_C AAA AAA_22 AAA_24 AAA_5 CobU NTPase_1 AAA_16 AAA_14 ABC_tran AAA_18 RsgA_GTPase NACHT Isochorismatase Rad51 DZR TniB HypA
Other DBs
NCBI-ProteinID: AEW87473
UniProt: G8XBQ8
LinkDB
Position
complement(3123393..3124754)
AA seq 453 aa
MAKIKTSFFCQSCGSQFAKWQGQCTSCKEWNTLVEEIVQKEEKVTWKTESPTHKRAPKPL
LVHEIDSTEEIRMNTTDGELNRVLGGGLVPGSLTLLGGEPGIGKSTLLLQISLKLPYKTL
YVSGEESQKQIKMRAERITTKNDNCYILTETKTQNIFRQIETIEPDVVIIDSIQTLQTDY
IESSAGSISQIKECTAELIKFAKETNTPVILIGHITKDGTIAGPKILEHMVDTVLQFEGD
RNHIYRILRSLKNRFGSTSELGIYEMLGSGLREVSNPSEILISHKDEELSGTAIATTMEG
MRPLMIEIQALVSTAVYGTPQRSTTGYNAKRLNMILAVLEKRAGFRLGSKDVFLNITGGI
TVDDPAIDLAVVAAILSSNEDIPVGKDMCFAGEVGLSGEIRPVNRIDQRIQEAEKLGFST
IFVSKYSKISLKNHQITVKLVAKIEDVISELFG
NT seq 1362 nt   +upstreamnt  +downstreamnt
atggccaaaataaaaacctcttttttttgtcaaagctgcggcagtcagtttgctaaatgg
caaggacagtgtacctcttgtaaagaatggaatactctagttgaagaaatagttcaaaaa
gaagaaaaagtgacttggaaaaccgagtctcctactcataaaagagctccaaagcccctt
ttagttcatgaaattgattctacggaagaaatccgaatgaacacaactgatggagaatta
aaccgcgttttaggtggcggattagttccaggttcactaaccttattaggaggtgaacct
ggcattggaaagagtactttattgcttcaaatatctcttaagttaccttataaaacgcta
tatgtttcaggtgaagaaagccagaaacaaataaaaatgcgagcagaacgaattactacc
aaaaatgataactgttatatattaacagaaaccaaaactcaaaacatttttagacaaatt
gaaacgattgaacccgatgtggttataatagattccatacaaactttacaaacggattat
atagaatcctcagcaggcagtatttctcaaattaaagaatgtacggcagagcttattaaa
tttgctaaagaaaccaatacccctgtcattctaattggtcatataacaaaggatggcacc
attgcaggaccaaagatcttagaacacatggtagataccgtattgcagtttgaaggagat
cgaaatcatatttatcgcattttacgatcgctcaaaaaccgttttggttctacatccgaa
ttgggtatttatgaaatgcttggatcaggacttagagaggttagtaatccttctgaaata
ctaatatctcataaggatgaagaattatcaggcaccgctatagccacaaccatggaaggt
atgcgccctctaatgattgaaatacaagcactcgtttctacagccgtatatggaacacct
caaagaagcactacgggttataatgccaaaagactcaatatgatacttgctgttttagaa
aaaagagcaggcttccgattagggtctaaagacgtttttttaaatattacaggcgggatt
acagtagatgatccagccattgacctagcagttgtagccgccatactttcttctaacgaa
gatattcccgtaggaaaagatatgtgttttgcaggcgaagtaggattatcaggagaaata
cgccccgttaatagaattgatcaacgaatacaagaagcggaaaaacttggtttttcaacc
atatttgtatctaaatatagcaaaatatcattgaaaaatcatcaaataacagtaaaacta
gttgccaaaattgaagatgtaatcagtgaattatttggataa

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