Entry |
|
Name |
(GenBank) DNA repair protein RadA
|
KO |
K04485 | DNA repair protein RadA/Sms |
|
Organism |
fco Flavobacterium columnare
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Brite |
KEGG Orthology (KO) [BR:fco00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:fco03400]
FCOL_13390
DNA repair and recombination proteins [BR:fco03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FCOL_13390
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SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
complement(3123393..3124754)
|
AA seq |
453 aa
MAKIKTSFFCQSCGSQFAKWQGQCTSCKEWNTLVEEIVQKEEKVTWKTESPTHKRAPKPL
LVHEIDSTEEIRMNTTDGELNRVLGGGLVPGSLTLLGGEPGIGKSTLLLQISLKLPYKTL
YVSGEESQKQIKMRAERITTKNDNCYILTETKTQNIFRQIETIEPDVVIIDSIQTLQTDY
IESSAGSISQIKECTAELIKFAKETNTPVILIGHITKDGTIAGPKILEHMVDTVLQFEGD
RNHIYRILRSLKNRFGSTSELGIYEMLGSGLREVSNPSEILISHKDEELSGTAIATTMEG
MRPLMIEIQALVSTAVYGTPQRSTTGYNAKRLNMILAVLEKRAGFRLGSKDVFLNITGGI
TVDDPAIDLAVVAAILSSNEDIPVGKDMCFAGEVGLSGEIRPVNRIDQRIQEAEKLGFST
IFVSKYSKISLKNHQITVKLVAKIEDVISELFG |
NT seq |
1362 nt +upstreamnt +downstreamnt
atggccaaaataaaaacctcttttttttgtcaaagctgcggcagtcagtttgctaaatgg
caaggacagtgtacctcttgtaaagaatggaatactctagttgaagaaatagttcaaaaa
gaagaaaaagtgacttggaaaaccgagtctcctactcataaaagagctccaaagcccctt
ttagttcatgaaattgattctacggaagaaatccgaatgaacacaactgatggagaatta
aaccgcgttttaggtggcggattagttccaggttcactaaccttattaggaggtgaacct
ggcattggaaagagtactttattgcttcaaatatctcttaagttaccttataaaacgcta
tatgtttcaggtgaagaaagccagaaacaaataaaaatgcgagcagaacgaattactacc
aaaaatgataactgttatatattaacagaaaccaaaactcaaaacatttttagacaaatt
gaaacgattgaacccgatgtggttataatagattccatacaaactttacaaacggattat
atagaatcctcagcaggcagtatttctcaaattaaagaatgtacggcagagcttattaaa
tttgctaaagaaaccaatacccctgtcattctaattggtcatataacaaaggatggcacc
attgcaggaccaaagatcttagaacacatggtagataccgtattgcagtttgaaggagat
cgaaatcatatttatcgcattttacgatcgctcaaaaaccgttttggttctacatccgaa
ttgggtatttatgaaatgcttggatcaggacttagagaggttagtaatccttctgaaata
ctaatatctcataaggatgaagaattatcaggcaccgctatagccacaaccatggaaggt
atgcgccctctaatgattgaaatacaagcactcgtttctacagccgtatatggaacacct
caaagaagcactacgggttataatgccaaaagactcaatatgatacttgctgttttagaa
aaaagagcaggcttccgattagggtctaaagacgtttttttaaatattacaggcgggatt
acagtagatgatccagccattgacctagcagttgtagccgccatactttcttctaacgaa
gatattcccgtaggaaaagatatgtgttttgcaggcgaagtaggattatcaggagaaata
cgccccgttaatagaattgatcaacgaatacaagaagcggaaaaacttggtttttcaacc
atatttgtatctaaatatagcaaaatatcattgaaaaatcatcaaataacagtaaaacta
gttgccaaaattgaagatgtaatcagtgaattatttggataa |