Flavobacterium columnare: FCOL_13520
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Entry
FCOL_13520 CDS
T01653
Name
(GenBank) thiol-activated cytolysin
KO
K11031
thiol-activated cytolysin
Organism
fco
Flavobacterium columnare
Pathway
fco02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCOL_13520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
fco02042
]
FCOL_13520
Bacterial toxins [BR:
fco02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Beta-pore-forming/Cholesterol-dependent
FCOL_13520
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Gene cluster
GFIT
Motif
Pfam:
Thiol_cytolysin
Nakanori
TnpV
Motif
Other DBs
NCBI-ProteinID:
AEW87499
UniProt:
G8X542
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Position
3154960..3156636
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AA seq
558 aa
AA seq
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MNFLKLNAKWTLLALMQLSVLSCNKEDVAANESDKDGKNLKQESIHDGPKSELQISRRIL
SSPPDQVGSASCKTIEETYNKTFDNFSKLGAATHLLWPGNIVQGGTIVSGNLASIPIDPK
GRNTIEVKVDAFSSSESKSSSKEVENPTAGKVQDALEKILNSYYTSGTKFPANYAVEIQR
TYDSKQLQVALGVGYTGPAVGLSASLGLSFKKNKTYYAVTLKQKFFNVSVSAKPGLQGDF
GWIKKEYPRSEFDKYIGERNPAAYISSVTYGRLYTLVYESDESSFDMEQALNFAYKNPAA
SITVDQKLKYSTTLQNTKVYAKQLGGSASGGLDAAFGAFAGNFEKVRDFVVNGADVSKDN
PGYPIEYTAVNIESNLDATINVNGISNYSECEETVYTAKTLDEAKKRVEDLKTEYGYNSC
AKIIIFNNTDREILLKNYTPWSGSTFSNLPPTSIPAGRYGYLLAVNQYGTSKGTYNQISY
LFDNKTISFGTYAPVESGRTNNVLVNFREITETELNYNSTRPSIEKIQDNIRIRGTIESK
AAPYVNFTITGKGNSVIN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaattttttaaaactaaatgccaagtggacattgcttgcattaatgcaattgtcggtt
ctaagttgtaataaagaagatgttgcagcgaatgaatcagataaggatggaaaaaatcta
aaacaagaaagcattcatgatggtcctaaatcagaattacagattagtagaagaattctt
tcgtcaccaccagatcaagtaggatctgcgagttgtaaaacgattgaagaaacttataat
aaaacatttgataatttttcaaaattaggagcagcgactcatttattgtggccaggaaat
attgtgcaaggtgggactattgtttcaggaaacttagcatctattcctattgatccaaaa
ggaagaaatactattgaggtgaaggtagatgctttttcatctagtgaatcaaaatcatca
agtaaggaggtagaaaatccaacagcaggtaaagtacaagatgctttagaaaaaatatta
aactcatattatacatcaggaactaagtttcctgctaattatgctgttgaaattcaaaga
acgtatgatagtaaacaattacaagtagctttaggtgttggttatacagggcctgctgta
ggtttgtcagcgagtttggggctaagctttaaaaagaacaagacttattatgccgttacg
cttaaacaaaaattctttaacgtatcagtatctgcaaaaccaggacttcaaggggatttt
ggttggataaaaaaagagtatccgagatctgaatttgataaatatataggagaaagaaat
ccagctgcctatatatcatctgtaacctatggtagattatatactttagtttacgaatcc
gatgaaagttcttttgatatggaacaagctttaaattttgcttataaaaatccagctgca
agtataacagttgatcaaaaattaaaatattctactacattacaaaatacaaaagtatat
gcaaaacagttaggaggtagtgcttctggtggattagatgcagcatttggagcatttgca
ggaaattttgaaaaagtaagagattttgtggtgaatggagcagatgtttctaaagataat
ccaggatacccaatagaatacacagctgtaaatattgaatcaaaccttgatgcgactatt
aacgttaatggaatatcaaattattcagaatgtgaagaaactgtatatacagcaaaaacg
cttgatgaagctaaaaaaagagttgaagacttaaaaacggaatatggttataatagttgt
gctaagattattatatttaataacacagatagagaaattctattaaaaaattatactcct
tggtctggtagtactttttcaaacttaccacctacttctattccagcaggaagatatgga
tatttattagctgttaatcaatatggtacttcaaaaggtacatataaccaaatttcatat
ttatttgataataaaacaataagtttcggtacctatgcgcccgttgaatcaggtagaacg
aacaatgttttagttaattttagagaaataacagaaacagagttaaattataatagcacg
agaccttctatagaaaaaatacaagataatattcgaattagaggaactattgaatcaaaa
gctgcaccgtatgttaatttcacgattactggtaaaggaaatagtgttataaactaa
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