Fructilactobacillus carniphilus: M3M37_00740
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Entry
M3M37_00740 CDS
T08865
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fcp
Fructilactobacillus carniphilus
Pathway
fcp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fcp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M3M37_00740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcp03021
]
M3M37_00740
03400 DNA repair and recombination proteins [BR:
fcp03400
]
M3M37_00740
Enzymes [BR:
fcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M3M37_00740
Transcription machinery [BR:
fcp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M3M37_00740
DNA repair and recombination proteins [BR:
fcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M3M37_00740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF4249
Ig_GpJ_C
SAM_EPH
DUF211
Motif
Other DBs
NCBI-ProteinID:
USS90786
LinkDB
All DBs
Position
139816..140772
Genome browser
AA seq
318 aa
AA seq
DB search
MIEFEKPNIHKIEETNNYGEVVVEPLERGYGTTLGNSLRRVLLASLPGAAVTSVQIDGVL
HEFSTVKGVTEDVTKIILNLKKLKLKIDGDDDQNETHTMSINVTGPADVTGADLATDSDT
TVLNPDLHIATVAEGATLHMTVTANKGRGYVSAEENKARNDDMPIGVLPVDSIYTPIERV
NYQVEDTRVGQRDDFDKLTLDVWTNGSITPSEAISLAAKVLSQHLEMFVDLTDKAQQANV
MVEKEESHKEKMLEMSIEELDLSVRSYNCLKRAGINTVQELTDKSMADMMKVRNLGRKSL
EEIEQKLEALGLSFRKED
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaagccaaacattcataaaattgaagaaacaaataactatggtgaa
gtagttgtagaaccattagaacgtggttatggaacaaccttagggaactcgttacggcgg
gttttgctagcttctttaccaggcgctgcagttaccagtgttcaaattgatggtgtttta
cacgaattttcaactgttaaaggtgtcacagaagatgtgacaaaaatcattttgaacttg
aaaaagttgaagttgaaaatcgatggtgacgacgatcagaacgaaactcatacgatgagt
atcaacgtaactggtccggccgatgtaaccggagccgatttagcaaccgatagtgataca
acggttctaaatcctgatttacacatcgcaacggttgctgaaggtgccaccttacacatg
acggtcacggccaacaagggtcgcggttatgtctcagctgaagaaaacaaggctagaaat
gacgatatgcccattggtgtgctaccagtcgattctatctataccccaatcgaacgtgtt
aactatcaagttgaagacacgcgtgttggacagcgtgatgacttcgataaattgactctc
gatgtttggactaatggttcaattactccttctgaagcgattagtttagctgccaaagtg
ttatcacaacacttggaaatgttcgtggacttgaccgacaaggcccaacaagctaacgtc
atggtggaaaaagaagaaagccataaagaaaaaatgctcgaaatgtcaattgaagaactg
gatctttccgttcgttcttacaattgtttgaaacgggctggaattaataccgtccaagaa
ttaactgataaatctatggctgatatgatgaaagttcggaacttgggacgcaagtcactg
gaagaaatcgaacagaagttagaagcacttggattatcatttcggaaagaagactaa
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