Fructilactobacillus carniphilus: M3M37_03340
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Entry
M3M37_03340 CDS
T08865
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
fcp
Fructilactobacillus carniphilus
Brite
KEGG Orthology (KO) [BR:
fcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcp03019
]
M3M37_03340
03009 Ribosome biogenesis [BR:
fcp03009
]
M3M37_03340
Enzymes [BR:
fcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M3M37_03340
Messenger RNA biogenesis [BR:
fcp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M3M37_03340
Ribosome biogenesis [BR:
fcp03009
]
Prokaryotic type
rRNA helicases
M3M37_03340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
USS91244
LinkDB
All DBs
Position
complement(636017..637378)
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AA seq
453 aa
AA seq
DB search
MSASFTDYHFQPFIMEALQELDFKKPTPIQAQVIPTIQHGNSIVGKSATGSGKTHAFLLP
LFDQLDPADHRPQVIITTPSRELSYQIYENIKQLVRHSSSVIHVENYVGGTDKERQLEKL
DREQPQVVVGTPGRILDIVKSGKLEINAARRLVIDEADMTLDLGFLTEVDQIAARMAKDL
QMMVFSATIPPKLKPFLQKYLKNPVITDIPTEHVINADVSNWLISTKGQDKNRLIFQLLT
MGNPYLALVFANTRGRADELEKYLQEQGLKVAKLHGGMQPRVRKRVMKQIQNLDFQYVVA
TDLAARGIDITGVSLVINDDLPSDSEYFVHRVGRTGRNGMPGTAITLYAPDEEAKIAELE
AKGVQFQPKEIKHGEVVDTYDRRRRQQYRGHHDQLDGSTLGMIKKKKKHVKPGYKKKIKR
AIKIKDDQNRKIELRQQVRAKKKQKKRSSQRYQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttcgtttacagactatcattttcagccgtttatcatggaagccctgcaggaa
ttagactttaaaaaaccgacccccattcaagcccaggtcattccaacgattcaacacggt
aatagtatcgtgggaaagtccgcgacgggaagtggaaagacccatgcctttttactgccg
ttgttcgaccagttagatccagctgaccaccgcccccaggtgatcattaccacgccgagt
cgggagttatcctatcaaatttacgaaaacattaagcaattggtacgccatagttccagt
gttattcacgtggaaaattacgtgggtgggaccgacaaggaacgccagttagaaaaatta
gatcgggaacagccacaggtagtggtggggacgcccggccggatcttagacatcgtgaaa
agcggaaagttggaaattaacgctgcccggcggttggtgattgatgaagccgatatgacc
ttggatttgggctttttaacggaagtagaccaaattgcggctcgaatggcgaaggacctg
cagatgatggtcttttccgccaccattccgcccaagttgaaacctttcctgcaaaaatac
ctgaaaaatccagtgattactgatattcccacggaacacgtgattaatgcagacgtttct
aactggttaatttctactaaaggtcaggacaagaaccggttaatttttcaattgttaacc
atggggaatccgtacctggcgttggtctttgccaacacgcgcggacgggccgacgaactg
gaaaagtatttacaagagcaaggattaaaagtagcgaagttgcatgggggaatgcaaccc
cgagtccgtaagcgggtgatgaaacagattcaaaacctcgactttcagtacgtggtggca
acggatttggccgcccgaggaattgatattactggagtgtcattggtcattaatgatgat
ttgccgtctgattccgagtactttgtgcaccgcgtgggacgaaccgggcgaaacgggatg
ccgggaacggccattacgctctacgcccctgatgaggaagcaaaaattgcggagttagaa
gcaaagggtgtgcagttccagcccaaggaaattaagcatggtgaagtggttgatacctat
gaccgtcgacgccggcaacagtaccgcgggcatcacgaccagcttgatggttccacgctg
ggtatgattaagaaaaagaaaaaacacgttaaacctggttataaaaagaaaattaagcgc
gccattaaaattaaagatgatcagaaccgaaagattgaactgcgccaacaagttcgcgcc
aagaagaaacagaaaaagcgcagttcgcagcgttatcaataa
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