Fructilactobacillus carniphilus: M3M37_06420
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Entry
M3M37_06420 CDS
T08865
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
fcp
Fructilactobacillus carniphilus
Brite
KEGG Orthology (KO) [BR:
fcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcp03400
]
M3M37_06420
Enzymes [BR:
fcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M3M37_06420
DNA repair and recombination proteins [BR:
fcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
M3M37_06420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
USS90468
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All DBs
Position
1277591..1281133
Genome browser
AA seq
1180 aa
AA seq
DB search
MSLQFILGKASTDHAGQVIQAMQTSAAQHPSDQYFQIVPNNVKFEAELGTLKRLNLEEQA
TYAQNQIQTFSFSRLIWYFLRDHPAYQVPQLSSVAINMIIFQIITDHEADLTIYRGEGKQ
AGFIQQVAEQLMELQQGNVSPDDLQQLQQTATGELRNKLHDLAIIYRAFLAATDGKYLYK
AATLELLNEYLLRMPAQQLEQLHFYFTGFSELTAQELQLVHTLIRRAHVVVDLTLDQPVR
EVAPAPEAFFAQPGRLYYRLYQYAQAHSRILPDQYAPTRDLQPGLQQLEEYWISSSELDR
QLPEAPRSNPAVHVLQAATPFDELMNVSTKIRQLVATGKYRYGDFLVVARNLSDYENIID
PIFSMQQIPYFTDIQKQMENHPLVVLLQALFAIYKPNRARNYRYEDVMKLLKTELLIPKQ
TEKLADFRWQLALCENLVLKNGYYGKKWTQQEDWKYTTVVDETTGVVVDKNQAFSKAINQ
IRHFVKDNLPPFYRRLTKAKTGREAAQILYQFLVNHGVPDRLQEWQQQATEAGNLQEAGQ
AEQVWNEFCHILDDYVNVLGDQEFVQDDFLALLQAGFVGATYSQIPSTLDQVTISEMGRY
HLRDKRITIVVGADDHSLPVRIERQSLLSDGDRDQLSEQLAPDQFLATTSETKMVAEPYE
DYLTFLTPQDQLYFSHHAGNGADDTLLKQSPYVQRIQEFFQLTPEVFHAQPDANELDVQP
YLGSPRATLKYLIPAALASRKQQQKLNASWAAVRTTLEQDANPQLQRLTRNLMSSLDYRN
EPTPLTNEIVTGLYGNQILTSISKLEEFYSNPYEYFLEYGLRLKERDEFEINPADTGTFY
HEALDHLMKLVNQQQLELGDLDDQQVTELVTEVTTKLIEDDQAQRYEILQSSERMNYIKN
QLIKTVTEMAQALRNQARHVHMRPRQTEVAFGPGKHYQELKFALDNHKQVSVQGRIDRID
GMDVDGTDYLNIVDYKSSEREIKFAQVYDGTAMQMMTYMDAVLQNLESIGDTEQARLIGA
LYLHVFDPVLDYTELKNWQDPQQIQQRLLQKHKYNGILLADKDVLQSLGDQDVSAVYPFR
FKNDGDFYKDSKIISQADLNRVINHTEQLIQTAGNRIFAGDTRLWPARFQDKSNITNSAY
QSVMQFDPLLAENNYREVENLSMAEVLEKLRAEQKGGNHE
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagtttacagtttatcctgggaaaggcgagtacggaccatgcggggcaagtgattcaa
gcgatgcaaacgtctgccgcgcagcatcccagcgatcagtactttcaaattgttccgaat
aacgttaaattcgaagcagaattggggacgctgaaacgattgaacttggaagaacaggcg
acctacgcgcaaaaccaaattcaaacgttctcgttttcacggctgatttggtactttttg
cgggatcatccggcttatcaagtccctcagttatcttcagtggccattaatatgattatt
ttccagattatcaccgaccacgaagccgatttaaccatctaccggggcgaaggcaagcaa
gccggttttattcagcaggtcgccgagcaactgatggagttgcagcaggggaacgttagt
cccgatgatttacagcagctgcaacagacagcgaccggagaattacgcaataagctccat
gatctagctatcatttaccgggcttttttagccgcaaccgacgggaaatatttgtataaa
gcggcgaccttggaactattgaacgagtaccttttgcggatgcccgctcagcagttagag
cagctccacttttactttactggttttagtgagctgaccgcgcaggaactgcagttagtt
cacaccttgattcgcagagcgcacgtggtggtcgatttgacgctggatcaacccgttcgc
gaggtggctcccgcacctgaagcattctttgcgcaaccaggccggctctattaccggtta
taccaatatgcgcaagcacacagccggattctacccgatcagtatgcccccacgcgggac
ttacaacccgggttacaacagttagaagaatactggattagtagtagcgagttagaccgg
caattaccggaggcaccgcgatctaatccagcggtgcacgtgttacaggctgcgacgccc
tttgatgagttaatgaacgtttcgaccaagattcgccaattagtcgccaccgggaagtac
cggtacggggatttcttggtggttgctcggaatttgagtgattacgaaaacatcattgac
cccattttctcaatgcaacaaatcccgtactttacggatatccagaagcagatggaaaat
catccgttggtagtactgttacaggccctctttgcgatttacaagcccaaccgggcccgc
aactatcgctacgaagacgtgatgaagctcttgaaaacggagctgttaattcccaaacaa
actgaaaaactagcggactttcgctggcaactggccttgtgtgaaaacctagtcttgaaa
aacggctactacggtaagaaatggacgcagcaagaagactggaagtacacgaccgtcgtg
gatgaaaccacgggcgtggtcgtggacaagaatcaggcgttttcaaaggccatcaatcag
attcgccactttgtgaaagataatttaccgccgttctaccgccggctgacgaaagccaag
accggtcgggaagcggcgcaaatcctgtaccagtttttggtgaaccatggagtccctgac
cgtttgcaagaatggcaacaacaggcgactgaagccgggaatcttcaggaagccggacag
gccgagcaggtgtggaatgaattttgccacattttagacgactacgtgaacgtattaggg
gaccaggaattcgtgcaggatgacttcttagcccttctacaagctggttttgtaggcgcc
acctactcccagattccgtcgaccttagatcaggtaacgatttcagaaatggggcggtac
cacctccgcgataaacggattacgattgtggtcggcgctgatgaccacagcttaccggtc
cgaattgaacgccagagtctgctgagtgatggggatcgagatcaactgagtgagcagtta
gccccggatcagtttttagctaccactagcgaaacgaaaatggtcgcggaaccgtacgaa
gactacttaacctttctgacgccgcaggatcagctgtatttttcccaccacgcgggtaat
ggggctgatgatacgttattgaagcaatccccctacgtgcagcggattcaggaatttttc
cagctgacgcccgaggtatttcacgctcaacctgatgcgaatgaattggacgtgcagccg
tatctagggtcgccccgggccacgttgaagtacttgattccagccgcgctagctagtcgg
aagcaacagcaaaagttaaacgctagttgggcagcagttcggactacgttagagcaggat
gctaatccgcaactgcaacgattgacgcgtaatctgatgagcagtttggattatcgtaac
gaaccgacgccattgaccaatgagattgtgacgggtctatatgggaaccaaattctgact
tcgatttccaaattggaagagttttattccaatccgtacgaatactttttggagtacggg
ttgcgactcaaagagcgggatgaatttgagattaatccagccgatacgggaaccttctac
catgaagcgctcgaccacttgatgaaactggtaaaccagcaacagctggaactaggggat
ttagatgatcaacaggttacggagctagtcacggaagtcaccacgaagctgattgaggat
gatcaggcgcaacgctacgaaattttgcaaagttcggagcggatgaactacattaagaat
caattgattaagacagtgactgagatggcgcaggccttgcggaatcaagctcggcacgtg
cacatgcggcctcgccaaaccgaggtcgcctttggcccgggtaaacactaccaagagctg
aagtttgctttagataatcacaaacaagttagtgtgcaggggcggattgaccgaatcgat
gggatggacgtcgatgggacggactacctcaacatcgtggactacaaatcaagtgagcgc
gagattaaatttgcgcaggtctacgatggaaccgccatgcagatgatgacgtacatggat
gccgtattacagaatttggaatccatcggagacacggagcaggcgcgtttgattggcgct
ttgtacctgcacgtctttgatccggtgctggattatacggaactgaaaaactggcaggat
ccacaacaaattcagcaacgtttgttacaaaaacacaagtacaatgggattttgttggcg
gataaagacgtcttgcaatcgctaggtgatcaggacgtgagcgctgtttatccgtttaga
tttaagaatgatggagatttctataaggatagcaaaatcatttcacaagccgatctaaac
cgggtaatcaatcacacggaacagttgattcaaacggccggaaaccgcatttttgcgggc
gatacccggttgtggccagctcggttccaggacaaatccaacatcaccaattcggcctat
caatccgtgatgcaatttgatccgttactggcagagaataactatcgagaggtggagaac
ctcagcatggcggaagtcctagaaaagttacgagcagaacagaaaggaggcaatcatgag
tga
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