Fructilactobacillus carniphilus: M3M37_07135
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Entry
M3M37_07135 CDS
T08865
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fcp
Fructilactobacillus carniphilus
Pathway
fcp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fcp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M3M37_07135 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcp03019
]
M3M37_07135 (rny)
Messenger RNA biogenesis [BR:
fcp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M3M37_07135 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
Prominin
LMBR1
DUF1016_N
Motif
Other DBs
NCBI-ProteinID:
USS90597
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Position
1421778..1423367
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AA seq
529 aa
AA seq
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MLYLGIAVVTLILGLVVGYGRENHQLNHRLSKATAQAEQIEQENQHQIKQVVQAIQTKVE
TDVAEHQDEVNEEIDEQVAENQLRQERVELQEKSLQSFASRLEKSEQNVQREQTELQELE
QTIDQTQQQADQLIQQRTDLLHEKSGLLPEQAEQTVLNMTQTALQQDYDQSVRDEHEEHV
LTATKEARQLMVEAIQNGPIDVPRDHIDRNVIIPDEGMRNKIVGKNEQRLRLLETLIGVD
LIFNPDSPETLIISTNDPIRREIARGAINELITARQLNNAVIENVVRSTERQVIEQLRLT
GEETCANLHLGWVHPDLMKLIGRLQYRTSYGQNVLQHSVEVAELCGMMATELGVNVRLAK
RAGLLHDIGKAVDREVNGTHVELGVQIAEAYGEEEAVVDAIASSHGDVDSETTISVLVRV
ADSMSGARPGARSESVEEYLNRLKGLERIANAHPEVKDSYAIQAGREIRMMVDPKASDDE
QTEQLAQQVCAQIEAELTYPGKIKVTAIRRSNAVQYVGGKQAPRKKHVS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgctttatttaggaattgcagtggtaacgttaattctgggattagtggttggttacggt
cgcgaaaaccaccagttgaatcaccgcctatcaaaagcgactgcccaagctgaacaaatc
gaacaggagaaccagcaccagattaaacaagtggtgcaggccatccaaaccaaggtggaa
acggacgtagctgagcaccaggacgaggtcaacgaagaaattgacgaacaagtggccgaa
aaccaactgcgccaggaacgagtggagctccaagaaaagagtttacagagctttgctagt
cggttagaaaaaagcgaacagaacgtgcaacgggagcaaaccgaattgcaggaactagag
caaacgattgaccaaacccagcagcaggccgaccagttaattcaacaacgcaccgattta
cttcacgaaaagagtgggctactgcccgagcaagccgaacagaccgtgttgaacatgacg
caaaccgcgttacaacaggactacgaccaatcggttcgggatgaacacgaagaacacgtg
ctgacggccaccaaggaagcccgccagttaatggtggaagccatccaaaatggtccaatc
gatgtgccacgcgatcacattgaccgcaacgtgattatcccagatgaggggatgcgcaat
aaaattgttgggaaaaacgaacaacgcttgcgtctgttggaaacgctaattggagtggat
ttaatcttcaatccagatagtcccgaaaccttgatcattagtacgaacgatccgattcgc
cgggaaattgcccggggcgcgattaacgaattaattacggcgcgccagctgaataacgcg
gtgattgagaacgtggttcgtagtaccgaacggcaggtgattgagcaacttcgcctgacc
ggagaagagacgtgcgcgaacctccatttaggttgggtacatccggacctgatgaaacta
atcggacgcttgcagtaccggactagttacgggcaaaacgtcttacaacactccgtcgaa
gtggccgagctttgtgggatgatggccacggagttaggtgtgaacgttcgcctcgccaaa
cgggccggtctgcttcatgatatcggaaaagcggtcgaccgcgaggtaaatggaacccac
gtggagttgggagtgcaaattgctgaagcctacggagaagaagaggccgtggtggatgca
attgcatcgtctcacggggacgttgattcagaaaccacgatttccgtcttagtccgagtg
gccgactccatgtcgggagcacggccgggcgcgcggagtgaatccgtggaagaatatttg
aaccgactcaagggcttggaacgaattgccaacgctcatcctgaagtaaaggatagctat
gcgattcaagctggtcgggaaattcggatgatggtggatccgaaggccagtgatgacgag
caaacggagcagttagctcaacaggtttgtgcgcaaatcgaagctgaactgacgtatccc
ggtaaaatcaaggtaacggcgattcgtcgatcgaacgccgttcagtacgtgggtggcaaa
caagccccacggaaaaaacacgttagttaa
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