Flavobacterium crocinum: HYN56_01925
Help
Entry
HYN56_01925 CDS
T06596
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fcr
Flavobacterium crocinum
Pathway
fcr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fcr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HYN56_01925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcr03021
]
HYN56_01925
03400 DNA repair and recombination proteins [BR:
fcr03400
]
HYN56_01925
Enzymes [BR:
fcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HYN56_01925
Transcription machinery [BR:
fcr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HYN56_01925
DNA repair and recombination proteins [BR:
fcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HYN56_01925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AWK03040
UniProt:
A0A2S1YG83
LinkDB
All DBs
Position
complement(401950..402942)
Genome browser
AA seq
330 aa
AA seq
DB search
MAIFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSALEGYAITSVRIE
GVDHEFSTISGVVEDVTEIILNLKQVRFKRQIEDIDNESVTISVSGKDQLTAGDFQKFIS
GFQVLNPDLVICNLDSKIKLNFDLTIEKGRGYVPAEENKKQNAAIGTIFTDSIFTPVKNV
KYAIENFRVEQKTDYEKLVFEIKTDGSINPKDALTEAAKVLIHHFMLFSDERITLEADEI
AQTESYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELDELVAVKNLTFGMDLAKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatttaattttcaaaagcccgataaagttatcatgatcgattcaaccgatttt
gaaggtaaatttgaatttagacctttagaacctggttacggattgacagttggtaatgca
cttagaagagttttgctttcagcattagaaggttatgcaattacatctgttcgtatcgaa
ggtgtagatcatgagttttctactatttcaggtgttgttgaagatgttaccgaaattatc
cttaatctaaaacaagtacgtttcaaacgtcaaattgaagatatcgataatgaatcagtt
actatttctgtttctggtaaagatcaattaacagcaggtgattttcaaaaatttatttca
ggtttccaagttctgaatccagaccttgttatctgtaatttagattctaaaatcaaattg
aatttcgatttaacaatcgaaaaaggtagaggatacgtgcctgctgaagagaacaaaaaa
cagaatgctgcaattggaacgatttttacagattctatttttactccggtaaaaaatgta
aaatatgcaatcgaaaatttccgtgttgagcaaaaaacggattatgaaaaattagttttt
gaaatcaaaactgatggatctattaatcctaaagatgctcttactgaagctgctaaagtt
ttaattcaccatttcatgttattctctgacgaaagaattacacttgaggctgacgaaatt
gcacaaacagaatcgtatgatgaagagtcattgcatatgagacaattgcttaaaactaag
cttgttgatatggatttatctgtgagagcattaaattgcttgaaagcggctgaagttgat
acacttggtgatttagtatctttcaataaaaatgacctaatgaaattccgtaatttcggt
aaaaaatctttaactgaacttgatgaacttgttgcagtgaagaatttaactttcggaatg
gatttagctaaatacaaattagataaagaataa
DBGET
integrated database retrieval system
