Flavobacterium crocinum: HYN56_07160
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Entry
HYN56_07160 CDS
T06596
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
fcr
Flavobacterium crocinum
Brite
KEGG Orthology (KO) [BR:
fcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcr03009
]
HYN56_07160
Enzymes [BR:
fcr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HYN56_07160
Ribosome biogenesis [BR:
fcr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HYN56_07160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AWK04021
UniProt:
A0A2S1YIX3
LinkDB
All DBs
Position
complement(1537878..1538786)
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AA seq
302 aa
AA seq
DB search
MNNKEGNNKRGGSRPNSSRSNSSKPKPPMAKRAQGPKKEKPEVKAAKEAAEQKLKKQNQA
PKRQKASDEIRLNKYISNSGVCSRRDADIYIQSGNVKVNGTVVTEMGYLVKINDVVNFDG
VTLTPEKKEYILLNKPKNFTTAFDEGQEFRNVLELVRGATNAKIAAVGRMDKNTTGLLLF
TNDTDMIRKFTLPNQKSSKIYQVSLDKNLKFEDLDKISKGLVLDGHRVSVEEVSYIDNEP
KSEVGLRLRTANVKVVRSIFESFDYNVLRIDRVAFAGLTKKNLPRGNWRFLTDQEIINLK
NM
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaaggaaggcaataataaaagaggcggatcgagaccaaacagctcaagatca
aactctagtaagccaaaaccaccaatggcgaaacgtgctcaagggccgaaaaaagaaaag
ccggaggttaaagcggcgaaggaagctgctgaacaaaaattaaagaaacaaaatcaggct
ccgaaaagacaaaaggcttcagatgaaattcgtctgaataagtacatctctaattctggt
gtttgttctcgtcgtgatgccgacatttatattcagtccggaaatgtaaaagtgaacgga
actgtggttaccgaaatggggtatttagtaaaaattaatgatgtggtaaactttgacggg
gttactttgactccggaaaagaaagaatacatcttgttgaataaacctaaaaactttacg
actgcttttgacgaaggacaggagtttcgtaacgttctggaacttgttcgtggtgcaaca
aatgcaaaaattgcagctgttggaagaatggacaagaacacaactggtttgttattgttt
acaaatgataccgatatgattcgtaagtttactttaccgaatcagaaatcatctaaaatt
tatcaggtttctttagacaagaacttaaaatttgaggatctggataaaatcagcaaaggt
ttggttcttgacggacaccgtgtttctgttgaagaagtaagctatatagataacgaacct
aaaagtgaggttggtttaagattacgtactgcaaatgtaaaagtagtacgctctattttt
gagtcttttgactacaatgtattgcgtattgaccgtgtagcatttgctggtttgaccaaa
aagaatcttccgagaggaaactggcgctttttgaccgatcaggaaattatcaatttgaaa
aacatgtaa
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