Flavobacterium crocinum: HYN56_07945
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Entry
HYN56_07945 CDS
T06596
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
fcr
Flavobacterium crocinum
Brite
KEGG Orthology (KO) [BR:
fcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcr03019
]
HYN56_07945
03009 Ribosome biogenesis [BR:
fcr03009
]
HYN56_07945
Messenger RNA biogenesis [BR:
fcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HYN56_07945
Ribosome biogenesis [BR:
fcr03009
]
Prokaryotic type
rRNA processing factors
HYN56_07945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DUF6305
Motif
Other DBs
NCBI-ProteinID:
AWK04166
UniProt:
A0A2S1YJH0
LinkDB
All DBs
Position
complement(1722244..1723788)
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AA seq
514 aa
AA seq
DB search
MNKELIIRSSSEAVDFALLKDGKLIELHKEEEKSNFQVGDIFIAKIRKPVAGLNAAFVNV
GFEKDAFLHYHDLGPNLASQLKFIKLVSAGKLKDFSLKTFQFEKEIDKDGIITDILSANQ
SVLVQVVKEPISTKGPRISAELSLAGRFIVLVPFSDRVSISQKIEDKKEKDRLKKLVLSI
KPKGFGVIVRTVAEGKNVAELEKDLQNLLGRWSAMCKKLPTAHHPSKVLGELNRASSILR
DVFNDTFSGIQIDDEELYHQTKEYLQEIAPSKQSIVKFYQSNDTPIFEKYNIERQIKTSF
GRTVSMSKGAYLIIEHTEALHVIDVNSGNRSNKATNQEDTAMEVNMIAAAEIARQLRLRD
MGGIIVVDFIDMSNPENRKVLFDFLREEMSDDKAKHKILPPSKFGLVQITRQRVRPEVNI
KTREEDPNKVNGEIEAPILIIDKITSDLERLLKTHNKVVLNTHPFVAAYLSKGFPSLRSK
WFFEHKKWVKIIPRDAYTYLEYHFYDKKGNVISE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagaattaatcattagatctagttctgaagcagtagattttgccttattaaaa
gatggaaaactaattgaattacacaaagaagaagaaaaaagcaactttcaggttggtgat
atttttattgccaaaatcagaaaaccagttgcaggacttaatgctgcttttgtgaatgta
ggctttgaaaaagatgcctttttacattatcacgatttgggtccaaatctagcttctcag
ctgaaattcataaaacttgtaagcgcaggtaaattaaaagatttctccctaaaaaccttt
cagtttgaaaaagagattgacaaagatggcatcattactgatattttaagtgccaatcaa
tctgtcttagttcaagtagttaaagaacctatatcaaccaagggcccaagaataagtgct
gagctttctcttgccggaagatttatcgttctggttcctttttctgatcgtgtttctatt
tctcaaaaaatagaagacaaaaaagaaaaggatcgtctaaaaaaacttgttctatcgatc
aaacctaaaggatttggtgttattgttcgtacagtagccgaaggcaaaaacgtagccgaa
ttagaaaaagatttgcagaacctgcttggcagatggtctgcaatgtgtaaaaaattacca
actgctcatcatccatcaaaagtattaggagagcttaacagagcttcttcaatattaaga
gatgtattcaacgataccttcagcggtattcaaatagatgatgaagagttgtaccatcaa
acgaaggagtatttgcaagaaattgcaccttccaaacaatcaattgtcaagttttatcaa
tcaaatgacactccgatttttgagaaatacaatatagagagacaaatcaaaacttcattt
ggccgaactgtttccatgagcaaaggtgcttacctaatcatagaacacactgaagcgctg
cacgttattgacgtaaacagcgggaaccgttccaacaaggcgaccaaccaggaagacaca
gccatggaagtgaatatgattgctgcagcagaaatcgccagacaattacgtctgcgagat
atgggcggaattatagttgttgattttatcgatatgtctaatcctgaaaacaggaaagtt
ttgttcgacttcttgcgagaagaaatgagcgacgataaagcaaagcataaaatattaccg
ccaagtaaatttggacttgttcagattacaagacagcgcgtaagaccagaagttaatatt
aaaaccagagaagaagatccaaataaagtcaatggcgaaattgaagcgccaatattaata
attgacaagatcacctctgatttagaaagacttttaaaaacccacaataaagttgtacta
aacacacatccgtttgtggctgcatacctcagtaaaggttttccatcattacgttcaaaa
tggttttttgaacataaaaagtgggtgaaaatcatacctcgtgacgcttacacgtactta
gaataccatttctacgataaaaaaggaaatgttatttcagaataa
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