Flavobacterium crocinum: HYN56_07950
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Entry
HYN56_07950 CDS
T06596
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
fcr
Flavobacterium crocinum
Brite
KEGG Orthology (KO) [BR:
fcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcr03032
]
HYN56_07950
03036 Chromosome and associated proteins [BR:
fcr03036
]
HYN56_07950
03400 DNA repair and recombination proteins [BR:
fcr03400
]
HYN56_07950
DNA replication proteins [BR:
fcr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HYN56_07950
Chromosome and associated proteins [BR:
fcr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HYN56_07950
DNA repair and recombination proteins [BR:
fcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HYN56_07950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AWK04167
UniProt:
A0A2S1YJB6
LinkDB
All DBs
Position
complement(1724170..1724460)
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AA seq
96 aa
AA seq
DB search
MTKADIVAKISEKLGLEKGDVQATVETFMEEVKTSLETGDNVYLRGFGSFIVKTRAEKTG
RNISKNTTIKIPAHNIPAFKPAKVFVEGVKTNNEAK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagcagatatcgtagcgaagatttcagagaaactaggtcttgaaaaaggagac
gttcaagcaacagtagaaacttttatggaagaagttaagacttctttagaaactggagac
aatgtttacctaagaggttttggtagttttatcgttaaaactagagctgaaaaaactgga
agaaacatttctaaaaacactacaattaagattccagcacacaacattcctgcgtttaaa
cctgcaaaagtttttgtagaaggagttaaaacaaacaacgaagcaaaataa
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