Flavobacterium crocinum: HYN56_09675
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Entry
HYN56_09675 CDS
T06596
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fcr
Flavobacterium crocinum
Brite
KEGG Orthology (KO) [BR:
fcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcr03032
]
HYN56_09675 (topA)
03400 DNA repair and recombination proteins [BR:
fcr03400
]
HYN56_09675 (topA)
Enzymes [BR:
fcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HYN56_09675 (topA)
DNA replication proteins [BR:
fcr03032
]
Prokaryotic type
DNA Topoisomerases
HYN56_09675 (topA)
DNA repair and recombination proteins [BR:
fcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYN56_09675 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
DUF4294
Asp1
Motif
Other DBs
NCBI-ProteinID:
AWK04486
UniProt:
A0A2S1YKE1
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All DBs
Position
2104730..2107246
Genome browser
AA seq
838 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGSDFQVESSYGHIADLPSKEIGVDVENGFKPKYEVSPDK
KALVTKLKSLSKNAETVWLASDEDREGEAISWHLAEELKLDKKKTKRIVFHEITKSAILK
AIDNPREIDYNLVNAQQARRVLDRLVGYELSPVLWRKIKGGLSAGRVQSVSVRLIVERER
EIQSFNAVATYSIVAEFVNEAGKAFKAKLPKNFNTKKEAEDFLNQNIGSKYKVADLETKP
TKKSPTAPFTTSTLQQEAARKLYLPVGITMQLAQRLYEAGLITYMRTDSVNLSKEAMDAA
QAEIIKSYGKEFSKPRVFANKNKGAQEAHEAIRPTDMSRHTVNIDRDQARLYDLIWKRTL
ASQMSDAQLERTNVKIEADNHDEIFTASGEVLLFEGFLKVYLEGHDDDEEEQEGMLPALK
VNEKLANNYITATERYSRPPARYTEASLVKKLEELGIGRPSTYAPTISTIINRNYVEKGT
LEGVERNYTQLILQNSKLGEKVLKENTGSDKGKLVPTDIGTIVTDFLVKNFGNILDYNFT
AKVEQDFDEIAEGNIDWAKMMQDFYNQFHPNVKEVEANAERESGERILGKDADGRQVSVR
LGKFGPMAQIGEADDEDKKFASLMADQNIGNITLEEALNLFLLPKSLGEYKGEEVEVNNG
RYGPYVRHGSVFISLPRGEDPLNVSKERAQELIDEKALADAPIAVYKGEAVQKGVGRFGP
FIKWNGLFVNVNKKYNFDNLSQADVEELIEEKLQKNIDKVIHNWEDEGIVVEKARWGRSV
ILKGKIKIELSKDVDATKLTLAQVQEMIEAKAPAKKAAAKKTTTTKKAPAKKTAAKKK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtaatagtggagtcacctgcaaaggcgaaaacgatcgagaaattt
ctcggaagtgattttcaggtggagtctagttatggtcacatagccgacttaccatcaaag
gaaataggagtagatgtagaaaatggttttaaacctaaatatgaagtttctccggataaa
aaagccttggtaacgaaactaaaatcactttctaagaatgccgaaacggtttggttggca
tccgatgaggaccgcgagggagaggctatttcatggcacttggcggaagaattaaaactg
gataaaaaaaaaaccaaacgaattgtttttcacgagattacaaaatctgcgattcttaaa
gcaatcgacaatccaagagaaattgattataatttagtaaacgcgcaacaggcacgtcgt
gttctggatcgtttagtgggttacgaattatctccggttttatggagaaaaattaaaggc
ggactttctgctgggcgtgtacaatctgtttcagtacgtttaattgtagagagagaacgc
gaaatacaaagttttaatgcagttgcaacgtattcaattgttgccgaatttgtaaacgaa
gccggaaaagctttcaaagcaaaattgccgaaaaacttcaatactaaaaaagaagccgaa
gatttcttaaatcaaaatatcggttctaaatataaggtagcagatttagaaactaaacct
accaaaaaatctccaacagcaccttttacaacttctacgttgcaacaagaagcggcaaga
aaattatacttgccagttggaatcaccatgcagttagcacaacgtctttacgaagcggga
cttattacttatatgagaaccgactctgtgaatctttctaaagaagcaatggacgcagcg
caagcagaaataatcaaatcttacggaaaagaattttctaagccgagagtttttgctaat
aaaaacaaaggagcacaagaagcgcacgaagcaattcgaccaacagatatgtctcgtcac
actgtgaatattgatcgtgaccaggctcgattatacgatttgatctggaaaagaactttg
gcttcacaaatgagcgatgcacagttagaaagaacaaacgtaaaaattgaagcagataat
catgatgaaatttttacagcttcaggagaagtattgctttttgaaggtttcttaaaagtg
tacttagaaggacatgatgatgatgaggaagagcaagaaggtatgcttccggctttaaaa
gtaaacgaaaaactggctaataactatattacagctacagaacgatattcaagaccgcct
gcacgctatactgaggcatctttggtgaaaaagttggaggaacttggaattgggcgtcca
tctacatatgcgccaacaatttctacgattatcaatagaaattatgttgaaaaaggaact
ttagaaggtgtagaacgtaactatacacagcttattttacaaaacagcaaattaggagag
aaggttctaaaagaaaatacaggttctgataaaggaaaattagttccaactgacatcgga
acaattgttactgatttcttagtaaagaatttcggaaacattctggattataatttcact
gcaaaagtagaacaggattttgacgagattgccgaaggaaatattgactgggcaaaaatg
atgcaggatttctacaatcagtttcatccaaatgtaaaagaagttgaggcaaatgcggaa
cgtgaaagcggggagagaattctaggaaaagatgctgacggaagacaagtttctgttcgt
ttaggaaaatttgggccaatggctcagattggagaagcagatgacgaagataaaaagttt
gccagcttaatggcagatcaaaatataggaaacattacacttgaagaagctttgaatttg
ttcttgcttccaaaaagtttaggagaatataaaggagaagaagtggaggtaaataacggt
cgttacggtccttatgttcgtcacggaagcgtttttatttcattgccaagaggagaagat
cctttaaatgtttctaaagaaagagctcaggaattaattgacgaaaaagcactcgctgat
gcgccaattgcagtttataaaggagaagcagttcaaaaaggagtgggacgttttggacca
ttcattaaatggaacggactttttgtaaatgtgaacaaaaaatacaattttgataatctt
tcacaagctgatgttgaggagttaatcgaagaaaaacttcagaaaaacattgacaaagtt
attcataattgggaagacgaagggattgtagtagagaaagctcgttggggacgttctgta
attctaaaaggaaaaatcaaaattgaattgagtaaagatgttgatgctactaagctgaca
ttggcacaggttcaggaaatgatagaagcaaaagcacctgcaaagaaagcagcggcaaaa
aaaacgacaacaactaaaaaagcgcctgctaaaaaaacagctgctaaaaagaaataa
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