Flavobacterium crocinum: HYN56_10770
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Entry
HYN56_10770 CDS
T06596
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
fcr
Flavobacterium crocinum
Brite
KEGG Orthology (KO) [BR:
fcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fcr03000
]
HYN56_10770
Transcription factors [BR:
fcr03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HYN56_10770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_11
HTH_3
HTH_38
MarR_2
HTH_24
MarR
HTH_10
HTH_Tnp_ISL3
HTH_23
Fe_dep_repress
HTH_19
HTH_Crp_2
HTH_IclR
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
AWK04677
UniProt:
A0A2S1YKS2
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All DBs
Position
2358114..2359142
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AA seq
342 aa
AA seq
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MEENKHVTIYDIAERLNLATSTISRALKDHHTISDKTIKKVKKTAEEMGFVPNTLAAGLR
GNKTRTIGVLIPTVTQPFLSSLISGIEITAQKSDYTVIIMQSHDSYEEEVNMAKSLYSNR
VSGVICSLAMETRDTAHFHQFSNNNIPLVFVDRVPKDYNTFRVVIDNYSAGYKATKHLIE
QGCIRIAHLTAGSELGNLYNERKRGYIEALKDHNIEVEEELIINLNSVTYEDGVKASNAL
FDLNPIPDGLFAPGDILAVSAIQTAKKRGIKVPEEFKVIGFNNDPISQIIDPNLSTITHP
AEKMGKASAEIIIKNLKSSKSDDAKEITFLNTEVLARESSEK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaataaacatgtaacgatttatgatattgcagagagattgaatttggcaaca
tctaccatttcacgagctttaaaagatcatcataccataagtgataaaacgattaagaaa
gtgaaaaaaactgctgaagaaatgggatttgttcccaatactttagcggcaggtttgcgc
ggaaacaaaacccgaacaattggtgttttaatcccaaccgttacacagcctttcttatct
tcattaatcagtggaattgaaattacagctcaaaaatcggattataccgtaatcattatg
cagtcgcatgactcgtatgaagaagaagttaatatggcgaaatctttgtacagcaatcgt
gtaagcggtgttatttgctctctggcaatggaaaccagagacacagcgcattttcatcag
ttttcaaacaataatattccattagtttttgtcgacagggttcccaaggattacaatact
tttagagttgttattgataattactctgcaggctacaaagcaactaaacaccttattgaa
caaggctgtattcgcattgcgcatttaacggccggctcagaattagggaatttatataac
gaaagaaaaagagggtatatagaggccttaaaagatcataatatcgaggttgaagaagag
ttgattatcaatcttaattctgttacttacgaagatggtgtgaaagccagcaacgcttta
tttgacttaaatccaattcctgacggattgtttgctccgggagatattctggcggtaagt
gcgattcagacggctaaaaaaagaggtattaaagttccagaagaatttaaagtgattggt
tttaataatgacccgatttcacagattatagatcctaatttatcgactatcacacatcct
gctgaaaaaatgggaaaagcttctgcagaaattattatcaaaaatctaaagtcttctaag
agtgatgatgccaaagaaattaccttcttaaatacggaagtattggcaagagaatcttca
gaaaaataa
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