Flavobacterium crocinum: HYN56_11950
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Entry
HYN56_11950 CDS
T06596
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fcr
Flavobacterium crocinum
Pathway
fcr00300
Lysine biosynthesis
fcr00470
D-Amino acid metabolism
fcr01100
Metabolic pathways
fcr01110
Biosynthesis of secondary metabolites
fcr01120
Microbial metabolism in diverse environments
fcr01230
Biosynthesis of amino acids
Module
fcr_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fcr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HYN56_11950 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HYN56_11950 (lysA)
Enzymes [BR:
fcr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HYN56_11950 (lysA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
MC7
HP1454-like_middle_dom
Motif
Other DBs
NCBI-ProteinID:
AWK04901
UniProt:
A0A2S1YLE9
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All DBs
Position
complement(2661172..2662395)
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AA seq
407 aa
AA seq
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MQAKDLLQLADQFGSPLYVYDAEKIQSQYNRLTKAFSKVENLRVNYAMKALSNVAILQLL
KNMGSGLDTVSIQEVLLGLHAGYEPERIFFTPNGVSLEEIEEVAAMGVQINIDNLSILEQ
FGTRHPNIPVCIRINPHVMAGGNANISVGHIDSKFGISVHQIPHILRIVENTKMSIVGIH
MHTGSDILDIEVFLYAAEILFDTAKHFKDLQFLDFGSGFKVPYKKDDIETDIEELGKKLS
KRFNAFCTEYGRDLTLIFEPGKFLVSEAGHFLVKVNVVKQTTSTVFAGIDSGFNHLIRPM
FYGSSHHIENISNPKGKERFYSVVGYICETDTFANNRRIAEITEGDILEFRNAGAYCFSM
SSNYNSRYKPAEVLWKDGKGILIRQAETFEDLLKNQIPLPEEVAAAV
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaaaagatttactgcagttagcagaccaatttggaagtccattgtatgtttac
gatgccgaaaaaatccaatctcagtacaaccgattaactaaagctttctctaaggtagaa
aacttaagagttaattacgccatgaaggcattgtctaatgttgcgattcttcagttatta
aagaacatggggtctggcttagacactgtatcaattcaggaagttttgttaggacttcat
gctggctatgaacccgaaagaattttctttacaccaaacggcgtttctcttgaagaaatc
gaagaagttgccgcaatgggtgtacaaatcaatatcgacaatttatctattttagagcaa
ttcggaacgagacatcctaatattccggtatgcatccgtatcaacccacacgtaatggcg
ggaggaaatgcaaatatttctgttggacatatcgatagtaaattcggaatttctgttcac
cagattccgcatatcttgcgaattgttgaaaatacaaaaatgagtattgttggaattcac
atgcacacaggatctgatattttagatatcgaagtattcttgtatgctgctgaaatcttg
ttcgacacggcaaaacatttcaaagatctacaattcttagatttcggaagcggattcaaa
gttccttacaaaaaagacgatatcgaaacagacatcgaagaattaggtaaaaaattatca
aaaagatttaatgctttctgtactgaatatggaagagatttaacattgattttcgaacca
ggaaaattcttggtaagcgaagcaggtcatttcttagtaaaagtaaacgtagtaaaacaa
acaacctcaacagttttcgccggaatcgacagtggtttcaaccatttaatccgtccaatg
ttttacggatcttcacatcatattgaaaacatttctaacccgaaaggaaaagagcgtttt
tattctgttgtaggatacatttgtgagactgatacttttgctaacaaccgtagaattgca
gaaatcacagaaggtgacattttagaatttagaaatgccggagcatactgtttctcaatg
tcatccaactacaattcaagatacaaaccagccgaagtactttggaaagacggaaaagga
atcttgattcgtcaagccgaaactttcgaagatttacttaaaaatcaaattccgttacca
gaagaagttgctgctgcggtttaa
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