Flavobacterium crocinum: HYN56_12445
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Entry
HYN56_12445 CDS
T06596
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fcr
Flavobacterium crocinum
Brite
KEGG Orthology (KO) [BR:
fcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcr03032
]
HYN56_12445 (gyrB)
03400 DNA repair and recombination proteins [BR:
fcr03400
]
HYN56_12445 (gyrB)
Enzymes [BR:
fcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HYN56_12445 (gyrB)
DNA replication proteins [BR:
fcr03032
]
Prokaryotic type
DNA Topoisomerases
HYN56_12445 (gyrB)
DNA repair and recombination proteins [BR:
fcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HYN56_12445 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AWK04993
UniProt:
A0A2S1YLS2
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All DBs
Position
2771011..2772951
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AA seq
646 aa
AA seq
DB search
MSEEIKKNNYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEAMGGHC
DSISVSINEDGSVTVEDNGRGIPVDLHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSVVNALSVHMKSTVFREGKIYEQEYERGKALYPVKQIGETEKRGTRQTFFPDDTIF
QQTTEFSYDTLSARMRELSFLNKGITITFTDKREVDDKGEFKSEVFHSDEGLKEYIRYLD
GNREPIVSHVISMDNDKGEIPVEVALIYNTSYTENIFSYVNNINTHEGGTHLQGFRSGLT
RTLKKYADASGLLDKLKFEIAGDDFREGLTAIISVKVSEPQFEGQTKTKLGNREVVSPVS
QAVGEMLENYLEENPNDAKLIIQKVILAAQARHAAKKAREMVQRKTVMGGGGLPGKLSDC
SEQDPARCEVYLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMHHKVFENEEIRNI
FTALGVTVGTAEDSKALNLEKLRYHKVIIMCDADVDGSHISTLILTFFFRFMKELIEEGH
VYIAAPPLYLVKKGNKKEYAWNDVQRDQANERMGGSANIQRYKGLGEMNAEQLWETTMDP
NFRTLRQVNIDSLAEADQVFSMLMGDEVPPRREFIEKNAVYANIDA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaatcaagaagaacaattattcagcagatagtattcaggcattagagggg
atggagcacgtaagaatgcgtccatcgatgtatattggagatgtaggggttcgaggactg
catcatttagtttatgaggttgttgataactctattgatgaggccatgggaggtcattgt
gattcgattagtgtttcaattaatgaagacggctctgttacagttgaagataacggacgt
ggtatcccggttgatttacataaaaaagaaggagtttccgcacttgaggttgtaatgact
aaaattggtgcgggaggtaagtttgataaagattcttataaagtgtccggaggtcttcac
ggtgtgggggtttctgtggtaaatgcactttcggttcatatgaaatctactgtatttaga
gaaggtaagatttatgagcaggaatacgaaagaggaaaagctttgtatccggtaaaacaa
attggagaaacagagaaaagagggacacgccagactttcttcccggatgatactatcttt
cagcaaacaacagagttttcttatgatactttatcagctcgtatgcgtgagctttctttc
ttaaacaaaggaattacaatcacgtttacagataagagagaagttgatgataaaggtgaa
tttaaaagtgaagtatttcattctgatgaagggcttaaagaatatattcgctatttagat
ggtaaccgtgagccaatcgtttctcatgttatcagtatggataatgacaaaggtgaaatt
ccggttgaggttgccttgatttataatacaagttatacagagaatattttctcttacgta
aataatatcaatactcacgaaggaggaacgcatttacagggttttagaagtggtttgaca
agaacacttaaaaaatatgcggatgcttctggtttattggataaattaaaattcgaaatt
gccggagatgacttccgtgaaggattaacagcgattatttcggtaaaagtttctgagcct
cagttcgaaggtcaaacgaaaactaagcttggaaatagagaagtggtttctccggtttct
caggctgttggagaaatgctggagaattatttggaagaaaatccaaatgatgcgaagttg
attattcaaaaagtaattttagcggctcaggcacgtcacgcagcgaaaaaggcgcgtgaa
atggtacagcgtaaaaccgttatgggtggcggcggattaccagggaaattatctgactgt
tcagagcaggatccggcaagatgtgaggtttacttagtcgagggagattcggctggtgga
acagcaaaacaaggacgtgatcgtaactttcaggcgattttgccattacgtggtaagatt
ctgaacgttgaaaaagcaatgcatcataaagtattcgaaaacgaagagatcagaaatatt
tttacagctttaggagtaacagttggaactgctgaagatagtaaggcgttaaatcttgaa
aaactaagatatcataaggtaatcatcatgtgtgatgccgatgtcgatggtagtcacatt
tctaccttaatattaacgttcttcttccgtttcatgaaagagcttattgaagaaggccac
gtttacattgcagcaccacctttatacttagttaagaaagggaacaaaaaggaatatgct
tggaatgatgtacagcgtgatcaggcgaacgaaagaatgggaggaagtgccaatattcaa
cgttataaaggtcttggagagatgaacgcggagcaattatgggaaactacaatggatcca
aatttcagaactttacgtcaggtaaatattgatagtctggcagaagctgaccaggttttc
tctatgttaatgggtgatgaagtaccgcctcgtagagagtttatcgagaaaaatgcagtt
tatgcaaatattgatgcataa
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