Flavobacterium crocinum: HYN56_14045
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Entry
HYN56_14045 CDS
T06596
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fcr
Flavobacterium crocinum
Pathway
fcr00040
Pentose and glucuronate interconversions
fcr01100
Metabolic pathways
fcr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HYN56_14045
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HYN56_14045
Enzymes [BR:
fcr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HYN56_14045
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
AWK05295
UniProt:
A0A2S1YMK1
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All DBs
Position
complement(3123200..3124318)
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AA seq
372 aa
AA seq
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MNLKSKLSMLILTLAFGFTACNSEEIASKTEAKIETTNEVIAETASTNSTAKIGNCAEVP
GWASQNGGTTGGGSSAETTVTTYAQLKSAIENTAVKVIKVSGTITVTTRLSFQDQTGKTI
YGANGAKLVSTNQTKDASGIINIKRCKNIIIRNLIFEGPGAYDTDGWDNAILDECTNVWV
DHCEFRDGVDGNFDIKNKSDYISVTYSKFHYLKPPKAGGSGGTDDHRFSNLIGSSDGATA
DRGKLRITFARCWWAPGCKERMPRVRFGKVHIVNSFFNSTVSNKCIAAGFEADIRVESNV
FEGVKNPIDLMTGFTAVTSTDNVFTSVTGTQAGSGTAFTPPYSIIKLNKTAVKADISANA
GPTLGGNVCGSF
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaaatcaaaactttcaatgttaatactaacattggctttcggatttacggca
tgtaactctgaagaaattgcttccaagacagaagctaaaatcgaaaccacaaatgaagtc
attgccgaaactgcttcaaccaattcaactgctaaaattggaaactgcgcagaggttcca
ggctgggcttcgcaaaacgggggaacaaccggaggaggttcttcagccgaaactactgtt
acgacttatgcgcaattgaaatcggctattgagaacactgctgtaaaagtcatcaaagtt
tccggaacgattactgttactacaagattatcttttcaggatcagactggtaaaaccatt
tacggtgcaaacggagccaaattggtttcaacaaatcagacgaaagatgcttcgggaatc
atcaatatcaaaagatgtaaaaacatcattatccgaaatttgatttttgaaggtccgggc
gcttatgacactgatggttgggacaatgctattttggacgaatgtaccaatgtttgggtg
gatcactgcgaattcagagatggtgttgacgggaactttgacatcaaaaacaaatcagat
tatatttcagttacctattctaagtttcattatctaaaaccaccaaaagcaggaggttcc
ggcggaacggacgatcataggttttctaacttgattggttcaagtgacggtgcaactgct
gaccgcggaaaattaagaatcacttttgcaagatgctggtgggctccgggttgtaaagaa
agaatgcctagagtgcgttttggaaaagtacacattgtaaacagtttctttaacagcacc
gtaagcaataaatgtattgcggcaggttttgaagccgacatccgtgtagaaagcaacgtt
tttgaaggggtaaaaaatccaattgatttaatgacaggttttacagccgttacatccact
gataatgtatttacaagtgtaacaggaactcaggccggaagcggtactgcttttacgccg
ccttattctattataaaattgaacaaaactgctgttaaagctgatatttctgcaaatgca
ggacctactttaggtgggaatgtttgtggctctttttaa
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