Flavobacterium crocinum: HYN56_22585
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Entry
HYN56_22585 CDS
T06596
Name
(GenBank) LysR family transcriptional regulator
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
fcr
Flavobacterium crocinum
Brite
KEGG Orthology (KO) [BR:
fcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fcr03000
]
HYN56_22585
Transcription factors [BR:
fcr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HYN56_22585
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Mga
Exonuc_VII_L
HTH_34
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AWK06861
UniProt:
A0A2S1YS14
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Position
5338768..5339655
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AA seq
295 aa
AA seq
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MELRHLKYFLAVAEELNFTKASEKLFISQPPLSRQIAELEEELQAKLFIRNNKKVELTEA
GKYFEKEIKTLFQNLELISAKTKKIAENVSGEFRIAYISSIYSAVISDLIKHLKAQFPYV
NFKLFEISTTKQIDALEQGKIEMGIIRSPVKSPKIKSHLWFQDGFSIVFNKKNIQIKSEK
EILNLKDETFVFFNKDYAPHYHEVLLELCAFYGFTPKIIHEANNINSIVQLVKNGLGISI
VPSNIAKNNQDPEIDFIELKKVNLFTNVSIITSKEDDSEITKTAVDFLLNKSSSR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggaattacgtcatttaaaatattttctggctgtagccgaagaactgaattttaccaaa
gcttcagaaaaactctttatttcacagccaccattaagccgacaaatagcagaattagaa
gaagaacttcaggcaaagcttttcattagaaataataaaaaagtcgaactcacagaagca
ggaaaatattttgaaaaagaaattaaaactcttttccagaatttggaacttatttctgca
aagacaaaaaagatagccgaaaatgtttctggtgaattcagaatcgcttatatcagttcg
atttattcagcagtaatttcagatttaataaaacatcttaaagcacaatttccttatgta
aatttcaaactttttgaaatctcaaccaccaaacaaatcgatgctttagaacaaggtaaa
atcgaaatgggaattattcgttctcccgtaaaatctccaaaaatcaaatcgcatttatgg
tttcaggacggattttcaattgtttttaataaaaagaatattcagataaaatcggaaaaa
gaaattctaaacctgaaagatgaaactttcgttttcttcaacaaagattatgcaccacat
tatcacgaagttttactcgaactttgcgcattttatggctttacgccaaagattattcac
gaagcgaataatatcaattcaatagttcaactagtcaaaaacggattaggaatttcgatt
gttccttcgaatattgcaaagaataatcaagatcctgaaattgattttattgaattgaag
aaagtgaatctttttacaaatgtttcaattataacttctaaagaggatgattctgaaatt
acaaaaactgctgttgattttttattgaataaaagtagttcacgctaa
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