Flavobacterium crocinum: HYN56_24450
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Entry
HYN56_24450 CDS
T06596
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
fcr
Flavobacterium crocinum
Brite
KEGG Orthology (KO) [BR:
fcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fcr01002
]
HYN56_24450
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fcr01011
]
HYN56_24450
Peptidases and inhibitors [BR:
fcr01002
]
Cysteine peptidases
Family C82
HYN56_24450
Peptidoglycan biosynthesis and degradation proteins [BR:
fcr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HYN56_24450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
DUF3908
Wzy_C_2
Motif
Other DBs
NCBI-ProteinID:
AWK07207
UniProt:
A0A2S1YSY4
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All DBs
Position
complement(5769427..5771004)
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AA seq
525 aa
AA seq
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MKIWYTPLIAVVFLIVFSCNSKADKKEENAINKVEKIPELKLTIDALRIAKFYESYPKLA
KFKTDVTSLYQKNKSTQLWQDNKGVVEFGNTLFNQYKNLDQEGLKANFPYNEQLSSVFEN
NASTKLSKEDTDLLLSNLYYYYGEKVGGFDEKTVVSLEWLLPRKKLNYQVLSDSIFKKST
IQDDKKKKMFSQYYKLRDALKEYREIEKKGGWKTIETGEDYKSLKVGDSSNVIAQIRERL
FVTKDLEEDTKSAVCDTVLMKAMKNYELRHGYAPKNSILKEHITDLNIPVSERIKTIIAN
MERCRWIDPELEKGQKYIEVNIPEFKLYIIEDGKIAFTSAVVVGKAMTKTVVFSGMMSNI
VFSPYWNVPPSIIKSEIKPGMARDKNYLQKKNLEWNNGSVRQLPGKNNSLGLVKFLFPNS
SNIYLHDTPSKSLFERESRAFSHGCVRVAKPRELAIELLKPDPAWNSARIDKAMHAGKES
WYTLKKKVPVYIGYFTAWVDREGNLNFYKDIYQRDESLLKLLTEE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttggtatacgcctttaatagcagttgtttttctaattgttttttcgtgtaat
tcgaaagcagataagaaagaagaaaatgcaataaataaagttgaaaagatcccggaatta
aagcttacaattgatgctctccgtattgcaaagttttatgaaagttatccaaaactggca
aaatttaaaacagatgtgacttccttgtatcaaaaaaataaatccactcaattgtggcag
gataataaaggtgttgttgaatttggtaacaccttattcaatcaatacaaaaatctggat
caggaaggtttaaaagctaattttccttataatgaacagctgagttccgtttttgagaat
aatgccagcaccaaactttcaaaagaagataccgatttactgctttctaatttgtattac
tattacggcgaaaaagtgggtggttttgacgaaaaaacagtcgtttctttagaatggctt
ttgcctcgtaaaaaactaaattaccaagtgctttccgattctatctttaaaaaatcaacc
attcaggacgataagaaaaaaaagatgttcagccagtattacaaacttcgtgatgcgctg
aaagaatatcgtgaaatagagaaaaaaggaggttggaaaacaattgaaaccggagaagat
tataaaagtctgaaagtaggtgattcatccaatgtgattgctcaaatcagggaaaggctt
tttgtaactaaagatcttgaggaagatactaaaagtgcggtttgcgatacagttttaatg
aaagccatgaaaaactatgaattgcgtcatggctatgcaccgaaaaatagtattttaaaa
gaacatattacagacttaaatattccggtttcggaaagaatcaaaacgattattgccaat
atggaacgctgccgctggattgatcctgaattggaaaaagggcagaaatacattgaagta
aatattcctgagtttaaactctatatcattgaagacggaaaaattgcttttacatctgca
gttgtggtgggaaaagccatgacaaaaacagttgttttcagtgggatgatgagtaatatc
gtttttagtccgtattggaatgttccgccgagcattataaaatcggaaataaagccggga
atggccagagataaaaattatttgcaaaagaaaaacttagaatggaataacggttcagtt
cgtcagcttcctgggaaaaataattcattgggattggttaagtttttatttccaaattca
agtaatatttatctgcatgatacgccttcaaaaagtttattcgaaagagaaagcagggca
ttcagccatggttgcgtacgtgtagcaaaaccaagagaattggcaatcgaattattaaaa
ccagatccggcttggaattctgccagaattgacaaagccatgcatgccggaaaagaaagc
tggtatacgttgaaaaaaaaagttcctgtttatattggctattttacggcttgggtagat
cgtgaaggcaatctaaatttctataaagatatttaccaaagagatgaaagtcttttgaaa
ttattgactgaagaataa
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