Flavobacterium collinsii: TRV642_0076
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Entry
TRV642_0076 CDS
T08703
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fcs
Flavobacterium collinsii
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcs03400
]
TRV642_0076
Enzymes [BR:
fcs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
TRV642_0076
DNA repair and recombination proteins [BR:
fcs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
TRV642_0076
Prokaryotic type
TRV642_0076
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CAI2765169
UniProt:
A0A9W4TC38
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All DBs
Position
TRV642:69524..70819
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AA seq
431 aa
AA seq
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MTKQKVSFFWFRRDLRLEDNTGLFHALQSDFPVIPLFIFDDEILENLPKNDARVQFIFES
LQKINEQLKAIDSSILIKKGTTSKVWESLITEFDIQHVFFNKDYEPFAILRDTSIQQLLT
QNNVAAHSFKDHVIFEEKEITKADGLPYTIYTPYKNKWLEKYHLLGQAPEFDTKPWYGNF
SKNQFTFLELAEIGFEKSIIKVLPPDLSQISNYKETRDFPAEDSTSYLSPHLRFGTVSIR
KLVNWANRKNQTFLSELIWREFFIQILFSFPNVVNHNFKSAYDGIQWRNNEEDFKRWCSG
TTGYPMVDAGMRQLNETGYMHNRVRMVVASFLCKHLLINWQWGEAYFAEKLLDFELASNV
GNWQWAAGTGCDAAPYFRVFNPEIQQKKFDEKGIYIRTWIPEFDLGYNEPMVDHAFARDR
AIETYKKGILR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaaaaagtttcctttttctggttccgacgcgacttgcgattagaagacaat
accggattatttcatgccctgcaatcggattttccagtaattccgcttttcatttttgat
gatgaaattctggaaaaccttcccaaaaatgatgcacgcgttcagtttatttttgagtca
cttcaaaaaataaacgaacaactaaaagcaattgattcctccattctcattaaaaaagga
actacaagtaaggtttgggaatcacttataactgaatttgacattcagcacgtttttttc
aataaagattacgagccttttgccatcctacgtgatacctctattcagcaattgttaacg
caaaataatgtggcagctcactcctttaaagatcatgtaatttttgaagagaaagaaatc
acaaaggccgacggacttccgtacaccatttatacgccttataaaaacaagtggcttgaa
aaataccatcttttaggacaggcgcctgagtttgacacaaaaccctggtacggaaacttc
agcaaaaatcagtttacctttctggaactagccgaaattggttttgaaaaaagtattata
aaagtgcttcctcccgatttaagccaaatttctaattataaagaaacacgtgattttccg
gctgaggacagtacttcttatctttcaccgcatttgcgttttggaacggttagtattcgc
aaactcgtaaattgggccaatcgaaaaaaccaaacctttttaagcgagctgatttggaga
gaattcttcatccagattttatttagcttcccaaatgttgtgaaccacaattttaaatcg
gcttacgacggcattcaatggcgtaataatgaagaagattttaaacgctggtgttccgga
actacgggttacccaatggttgatgccggaatgcgtcagctaaacgaaacgggctatatg
cacaatcgggttcgcatggtggtagccagttttttatgtaaacatttgctcattaactgg
caatggggtgaagcttattttgccgaaaaattattagatttcgaattggcttccaatgta
ggcaactggcagtgggcagcaggaacaggttgtgatgctgcaccttatttcagagttttc
aatcccgagattcaacaaaagaagtttgacgagaaaggaatctacatacgtacatggatt
ccggaattcgatttaggatataacgaacctatggtggatcatgcttttgcacgggatcgg
gcgatcgaaacttataaaaagggaattttgagatag
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