Flavobacterium collinsii: TRV642_0111
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Entry
TRV642_0111 CDS
T08703
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthetase subunit beta
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs00220
Arginine biosynthesis
fcs00240
Pyrimidine metabolism
fcs00250
Alanine, aspartate and glutamate metabolism
fcs01100
Metabolic pathways
fcs01110
Biosynthesis of secondary metabolites
fcs01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
TRV642_0111 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
TRV642_0111 (carB)
00220 Arginine biosynthesis
TRV642_0111 (carB)
Enzymes [BR:
fcs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
TRV642_0111 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
GARS_A
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_5
ATP-grasp_2
RimK
Motif
Other DBs
NCBI-ProteinID:
CAI2765202
UniProt:
A0A9W4TFP5
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All DBs
Position
TRV642:complement(103218..106073)
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AA seq
951 aa
AA seq
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MPKDTSIKSVLIIGSGPIVIGQACEFDYAGSQSARSIREEGIEVILINSNPATIMTDPSM
ADHIYLKPLTTKSIIEILKEHPQIDAVLPTMGGQTALNLCLEADEKGIWQDFGVRLIGVD
VNAINITEDREQFKQLLQKINVPTAPAKTATSYLEGKEIAQEFGFPLVIRPSFTLGGTGA
AVVYKKEDFDELLTRGLEASPIHEVLIDKALMGWKEYELELLRDKNDNVVIICSIENMDP
MGIHTGDSITVAPAMTLSDTTFQKLRDYAILMMRSIGNFAGGCNVQFAVSPDEKEDIVAI
EINPRVSRSSALASKATGYPIAKIASKLALGYNLDELQNQITKSTSALFEPTLDYVIVKI
PRWNFDKFEGADRTLGLQMKSVGEVMGIGRSFQEALHKATQSLEIKRNGLGADGKGYKNY
EQIIEKLTFASWDRVFVIYDAIAMGIPLSRIHEITKIDMWFLKQYEELYTLEKEISNYKI
TTLPKELLLEAKQKGFADRQIAHMMNCLESEVHTLRMDKNINRVFKLVDTCAAEFKAKTP
YYYSTFEAEIEKANGERYVDNESIVTEKKKIIVLGSGPNRIGQGIEFDYSCVHGVLAAKE
CGYETIMINCNPETVSTDFDTADKLYFEPVFWEHIYDIIQHEKPEGVIVQLGGQTALKLA
EKLSKYGVKIIGTSFDALDLAEDRGRFSDLLRELHIPFPDFGIAETADEASALADTLDFP
LLIRPSYVLGGQGMKIVINKKELEEHVINLLKTIPGNKLLLDHYLAGAIEAEADAICDAD
GNVYIIGIMEHIEPCGVHSGDSNATLPPFNLGEFVMQQIKDHTKKIARALKTVGLINIQF
AIKDDTVYIIEANPRASRTVPFIAKAYGEPYVNYATKVMLGHNKVTDFDFNPQLKGYAIK
QPVFSFSKFHNVNKALGPEMKSTGESILFIDDLKDDQFYELYSRRKMYLSK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagacacatcaataaaatcagttttaataatagggtcaggacctattgttatt
ggtcaagcttgcgaatttgattatgcaggttctcaatctgcacgttctattcgtgaagaa
gggattgaagttatcttgataaactcgaatccagcgacaattatgaccgacccaagtatg
gccgatcacatttacttgaaacctttaactacaaaatcgattattgaaattctgaaagaa
catccacaaattgatgctgttttgcctacaatgggggggcaaactgcattgaatttatgt
ttggaagctgacgaaaaaggaatttggcaggatttcggagtaagattgatcggggttgat
gtaaatgctattaatattacagaagacagagagcaatttaagcagcttttgcaaaaaatt
aatgttccaactgcaccggcaaaaacggctacttcttatttagaaggaaaagaaattgct
caggaatttggttttccgttagtaattcgtccttcgtttactcttgggggaacaggagct
gcagtggtttacaaaaaggaagattttgatgagcttttaacaagaggtcttgaagcttct
ccaatacatgaggttttgattgacaaagctttaatgggatggaaagagtatgagctggaa
cttttaagagataaaaatgataacgttgtgatcatttgttcgatcgaaaatatggaccca
atgggaattcatacaggagattcgattacagtggcgccggcaatgacattatcagatacg
acattccaaaaattacgtgactatgcaatcctgatgatgcgtagtattggaaattttgca
ggtggttgtaacgtacaattcgcagtttcgccagatgaaaaagaagatatcgtagccatc
gagattaatcctcgtgtgtcccgttcgtcagctttagcatcaaaagcaactgggtaccca
atcgctaaaattgcttccaagctggctttggggtacaacctggatgaattgcaaaatcaa
attacaaaatcgacttcggctctttttgaaccaactttagattatgtaattgtaaaaata
ccgcgttggaacttcgataaatttgaaggtgccgacagaactttaggacttcagatgaaa
tccgttggagaggtaatgggaattggacgctcgttccaggaagcgttacacaaagctacc
caatctttagaaataaaaagaaacggtttaggtgctgacggaaaaggatataagaactac
gagcaaattatcgagaaactaacttttgcaagttgggatcgtgtttttgtaatttatgat
gccatcgcaatgggaattccgttgagccgtattcatgaaatcacaaaaattgatatgtgg
ttcctgaaacaatatgaagaactttatactttagagaaagaaatttcaaattacaagata
acgactcttccgaaagaacttttactggaagcaaaacaaaaaggttttgccgacagacaa
attgcacacatgatgaactgtctggaaagtgaagtgcatactttgcgtatggataaaaat
atcaaccgtgtgtttaaactggtcgatacttgtgcggctgagtttaaggcaaaaacacct
tattactattcgacttttgaggcagaaatagaaaaagcaaatggtgagcgttacgtagac
aacgaaagtattgtaactgagaaaaagaaaatcatcgtcttaggttccggaccaaacaga
attggacagggaattgagtttgattattcttgtgtacacggagttttggcagctaaagaa
tgcggatacgaaacaatcatgattaactgtaatcctgaaacggtttcgactgattttgac
acagctgataaattatacttcgaaccggttttctgggaacatatttatgacatcattcag
catgaaaaaccggaaggtgttatcgtacagttaggtgggcagaccgctttgaaacttgct
gaaaaattatctaaatacggagtgaagattatcggaaccagctttgatgcacttgattta
gccgaagacagaggaagattctctgatttattgagagaattacacattcctttcccggat
ttcggaattgcagaaacggctgacgaagcttcggcacttgctgatactttagactttccc
ttattaattcgtccttcctacgtattaggcggtcagggaatgaaaattgtaatcaataag
aaagaactggaagagcacgtgatcaacttgttaaagacgatcccaggaaataaattgctt
ttagatcactatttggccggagcaatcgaggctgaagcggatgcgatttgtgatgctgac
ggaaatgtgtacattatcggaattatggagcatatcgagccttgtggagttcactctgga
gatagtaatgctactttgcctccttttaacttaggagaattcgtaatgcagcagatcaaa
gatcatacgaaaaaaatagctagagctttaaaaacagttggtttgatcaacattcagttt
gcaataaaagacgatacagtttatatcattgaggcaaatccaagagcttcaagaacagta
ccgtttattgcgaaagcatacggagagccttatgtgaactacgctacaaaagtaatgtta
ggacacaataaagtaacagattttgactttaatccacagttgaaaggatatgctattaaa
cagccggtcttctccttcagtaagttccataatgtaaataaagcattaggacctgagatg
aaatcaacaggagaaagcatcttgtttattgatgacttaaaagacgatcaattctacgaa
ttgtattcaagaagaaagatgtatttgagtaaataa
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