Flavobacterium collinsii: TRV642_0132
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Entry
TRV642_0132 CDS
T08703
Symbol
msbA
Name
(GenBank) ATP-dependent lipid A-core flippase
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TRV642_0132 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcs02000
]
TRV642_0132 (msbA)
Enzymes [BR:
fcs01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
TRV642_0132 (msbA)
Transporters [BR:
fcs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
TRV642_0132 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_24
AAA_22
Zeta_toxin
ABC_ATPase
AAA_29
AAA_16
nSTAND3
AAA
APS_kinase
MMR_HSR1
AAA_23
ATP-synt_ab
AAA_18
AAA_5
AAA_25
AAA_15
Motif
Other DBs
NCBI-ProteinID:
CAI2765221
UniProt:
A0A9W4TED7
LinkDB
All DBs
Position
TRV642:125822..127651
Genome browser
AA seq
609 aa
AA seq
DB search
MSNFKKIVPFIYPYKKYAFLNIFFNILYALFSTLSFMALIPMLQVLFDKTKKNYVMPTYD
GITHAKEFAENYLSYYITKNTDPNNPGFILSVMVALIISIFLLKNLADYLAMFFINFLRN
GVLRDMRNALYKKTLELPLAFYSEKRKGDVISRISADVNEVQTSFLAILELIVKEPLTIV
FTICAMLIISAKLTLFVFIFIPVSGYIISLIGKQLKKQSGKAQQEQGSFLSTIEETIGGL
KVVKGYNAENYFNTIFQNSTERFFKLSNSIGNRQNLASPASEFMGITVIAILLWYGGQMV
LIEKTLDGPSFIAYMGLAYNILTPAKAISKASYGVKRGNAAAERVLEILEQENTITSKDK
AFEKTSFDNNISIKNINFKYEDETVLKDFSLDIKKGQTVALVGQSGSGKSTIANLLTRFY
DVNDGTISIDGINIKDINLQSLRSLMGLVTQDSILFNDTIKANIALGKLDATDDEIIEAL
KIANAFEFVKELPLGIYTNIGDSGNKLSGGQKQRLSIARAVLKNPPIMILDEATSALDTE
SEKFVQVALENMMQNRTSIVIAHRLSTIQKADVIVVMQKGKIVEQGTHEELIAHNGTYNK
LVTMQSFES
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattttaaaaaaatagttccttttatatatccgtataaaaaatacgcattccta
aatatcttttttaatattttgtatgcgctttttagcacactttctttcatggcattaatt
cctatgcttcaggttttgtttgacaaaacaaagaagaattatgtgatgccaacttatgac
ggaattacccatgcaaaagaatttgccgaaaactatctaagctattacattacaaaaaat
acagaccctaataatcccggctttatactttctgtaatggtcgctcttatcatttcaatc
ttcttattgaaaaatttagccgattatctcgctatgttttttattaattttttgcgaaat
ggcgtattaagagacatgcgaaatgcgttgtataaaaaaacactggaattaccattggca
ttttattctgaaaaaagaaaaggggatgttatttcccgaatttctgctgatgtaaatgaa
gtccaaacttcgtttttagccatcttagaacttatcgtaaaagagccattaactattgtt
tttacgatatgtgctatgttaatcatcagtgccaaacttaccttatttgtctttattttt
atccctgtttcgggttacatcatttccttaatcggaaaacaattaaaaaaacagtccgga
aaagcgcaacaagaacaaggaagttttttatccactattgaagaaacaattggaggatta
aaagtcgtaaaaggatacaatgccgagaattacttcaatactatttttcaaaattcaaca
gaacgctttttcaaactatccaacagtatcgggaatcgtcagaacttagcatcacctgcc
agcgagtttatgggaatcactgtaattgcaattttactttggtacggaggacaaatggtt
ttaattgaaaaaacacttgacggcccttcttttattgcttatatgggattagcctacaat
attctaacccctgcaaaagcaatctctaaagcttcctacggagtaaaaagaggtaatgct
gctgctgaacgcgttcttgaaattttagagcaggaaaacacgattacatcaaaagataag
gcgttcgaaaaaacatcgttcgacaataacatcagcattaagaacatcaacttcaaatat
gaagatgaaaccgttttaaaagacttctctcttgacatcaaaaaagggcaaaccgttgca
cttgtcggacaatccggaagtggaaaaagtacgattgctaatttgctgacacgtttctac
gacgtaaacgatgggacaatttcaattgacggtatcaacatcaaggatatcaatttgcag
tctcttcgcagtttgatgggactggtaactcaggacagtattttattcaatgataccatc
aaagctaatattgccttaggaaaactcgacgcgacagacgatgaaattatcgaagcactt
aaaatcgctaatgcttttgaatttgtaaaagaacttcctttaggcatttacaccaacatt
ggcgacagcggaaacaaactttcaggaggacaaaaacaacgattatcaattgccagagcg
gtgttaaaaaaccctccaattatgattttggatgaagcaacatcagcattagacaccgaa
agtgaaaaatttgttcaggtggctttagaaaacatgatgcaaaacagaacttcgattgta
attgcccaccgtctttcgaccattcagaaagcagatgtaatcgtagttatgcaaaaagga
aaaattgtcgaacaaggaacacatgaagaactgattgcgcataacggaacatacaacaaa
ctagtgaccatgcagtctttcgaatcataa
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