Flavobacterium collinsii: TRV642_0157
Help
Entry
TRV642_0157 CDS
T08703
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
fcs
Flavobacterium collinsii
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcs03032
]
TRV642_0157 (hupB)
03036 Chromosome and associated proteins [BR:
fcs03036
]
TRV642_0157 (hupB)
03400 DNA repair and recombination proteins [BR:
fcs03400
]
TRV642_0157 (hupB)
DNA replication proteins [BR:
fcs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TRV642_0157 (hupB)
Chromosome and associated proteins [BR:
fcs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
TRV642_0157 (hupB)
DNA repair and recombination proteins [BR:
fcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
TRV642_0157 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
CAI2765245
UniProt:
A0A9W4TDT4
LinkDB
All DBs
Position
TRV642:154776..155048
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAADAGITKAAAKLALESFLGNVGATLKKGGRVSLVGFGSWSVSARAARDG
RNPQTGKTIQIAAKNVVKFKAGAELEGAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcagaattaatcgatgctatcgctgctgatgcaggaataacaaaagctgcg
gcaaaattggctttagaatcatttttaggaaacgtaggagctactttaaaaaaaggtggt
agagtttcgttagtaggttttggatcatggtcagtatctgctagagctgctagagacggt
agaaacccacaaactggaaaaactattcaaatcgctgctaaaaatgttgtaaaattcaaa
gctggagctgaattagaaggtgcagtgaactaa
DBGET
integrated database retrieval system
