Flavobacterium collinsii: TRV642_0348
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Entry
TRV642_0348 CDS
T08703
Symbol
vipB
Name
(GenBank) Vi polysaccharide biosynthesis protein VipB/TviC
KO
K02473
UDP-N-acetylglucosamine/UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase [EC:
5.1.3.7
5.1.3.45
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs00520
Amino sugar and nucleotide sugar metabolism
fcs00541
Biosynthesis of various nucleotide sugars
fcs01100
Metabolic pathways
fcs01250
Biosynthesis of nucleotide sugars
Module
fcs_M01036
UDP-GalNAcA biosynthesis, UDP-GlcNAc => UDP-GalNAcA
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
TRV642_0348 (vipB)
00541 Biosynthesis of various nucleotide sugars
TRV642_0348 (vipB)
Enzymes [BR:
fcs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.7 UDP-N-acetylglucosamine 4-epimerase
TRV642_0348 (vipB)
5.1.3.45 UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase
TRV642_0348 (vipB)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_10
RmlD_sub_bind
NmrA
NAD_binding_4
adh_short
Acetyltransf_11
Motif
Other DBs
NCBI-ProteinID:
CAI2765424
UniProt:
A0A9W4TCI5
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Position
TRV642:complement(362832..363797)
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AA seq
321 aa
AA seq
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MRILITGGAGFIGSNLSDFFLNKNYEVVCLDNFATGHRSNILPFLENVNYTLIEGDIRNL
KDCQKAVVGVDYVLHQAALGSVPRSINDPITTNDVNVTGFLNMLTASRDAKVKRFVYAAS
SSTYGDSQGLPKVEDVIGRPLSPYAITKYVNELYADIFSKTYGLETIGLRYFNVFGRKQD
PNGAYAAVIPKFVMQFMNYESPVINGDGNYSRDFTYIDNVIQMNELAMTSENLEAINTVY
NVAYGDRTTLTQLVELLKEYLSVYDPKIANIEVIYGPSRAGDIPHSLASIAKAENLLGYK
PKFSIQDGLKEAVAWYYDNLK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattaattactggaggagcgggatttattgggtctaatttatcggactttttt
ttgaataaaaattatgaagttgtttgtttggataactttgctactggacacagatcaaat
attttaccttttttggaaaatgtaaattatactttgatagaaggtgatattagaaatttg
aaagattgtcaaaaagcagttgtcggagttgattatgttctgcatcaagcagccttaggt
tctgttccaaggtctattaatgatcctattactactaatgatgttaatgtaactggtttt
ttgaatatgttaacggcttccagagatgcaaaagtaaaacgttttgtgtatgcggcaagt
tcatcaacatatggagattctcaaggattacccaaggtagaggatgttataggaagacct
ctttcaccatatgcaataactaagtatgttaatgaattgtatgcagatatttttagtaag
acatatggtttagaaactattgggttaagatattttaatgtgttcggtagaaaacaagat
ccaaatggagcatacgcagctgtcattcctaaatttgttatgcaatttatgaattatgaa
agtcctgttattaatggagacggtaactattcgagagattttacatatattgacaacgtt
attcagatgaatgaattagcgatgacaagtgaaaatctagaagctattaatactgtttat
aatgtggcttacggtgataggactacattaacgcaactagttgaattgctgaaggaatac
ctctctgtttatgatcctaaaattgctaatattgaagtgatctatggacctagtagagct
ggagatattccacattctctagctagtatagctaaagcggaaaacttgttaggttataag
ccaaaattctcgattcaagatggcttaaaggaagctgttgcatggtattatgataattta
aaataa
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