Flavobacterium collinsii: TRV642_0351
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Entry
TRV642_0351 CDS
T08703
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase 1
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs00521
Streptomycin biosynthesis
fcs00523
Polyketide sugar unit biosynthesis
fcs00525
Acarbose and validamycin biosynthesis
fcs00541
Biosynthesis of various nucleotide sugars
fcs01100
Metabolic pathways
fcs01110
Biosynthesis of secondary metabolites
fcs01250
Biosynthesis of nucleotide sugars
Module
fcs_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
TRV642_0351 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
TRV642_0351 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
TRV642_0351 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
TRV642_0351 (rfbB)
00525 Acarbose and validamycin biosynthesis
TRV642_0351 (rfbB)
Enzymes [BR:
fcs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
TRV642_0351 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NmrA
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
CAI2765427
UniProt:
A0A9W4TG49
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All DBs
Position
TRV642:complement(367411..368469)
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AA seq
352 aa
AA seq
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MESKMKKILVTGGAGFIGSHVVRRFVNKYPKYQIFNLDALTYAGNLENIKDIEDKPNYTF
IKGDIVDETFINELFSLHNFDGVLHLAAESHVDRSIEDPLAFVKTNVIGTMNLLNAAKNQ
WKDNFEGKRFYHISTDEVYGSLGAEGLFTETTSYDPNSPYSASKASSDHFVRAYGETYGL
PYVLTNCSNNYGSYHFPEKLIPLFINNIINNKPLPVYGDGNYTRDWLFVEDHAIAIDLVF
HEGKNHETYNIGGFNEWKNIDLVKLLCQIMDQKLGRNEGASQELITYVKDRPGHDLRYAI
DASKINTELGWKPSVTFEEGLEKTINWYLNNEEWLQNVTSGSYKDYYQKQYS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ttggaaagtaaaatgaagaaaattcttgtaaccggtggggctggttttattggttcacac
gtagtgagacgttttgtgaataaatatccaaaatatcaaatctttaatttagacgctttg
acttatgccggaaatcttgagaatattaaagatattgaggataaacctaattatacattt
ataaaaggagatatcgtagatgaaacttttataaatgaacttttctcccttcataatttc
gatggtgttttgcatttagctgcggaatcacatgttgatcgatcaattgaagatccatta
gcctttgtgaaaacaaatgtgatcggaacaatgaatttactaaacgctgcaaaaaatcag
tggaaagataattttgaaggtaaacgtttttatcatatcagtacggacgaagtttatggt
tcattaggagctgaaggactttttacagaaacaacttcttacgatcctaattctccgtat
tcagcttctaaagcaagctctgatcattttgtaagagcctacggagagacttatggcctg
ccttatgttttgacgaattgttctaacaactatgggtcgtatcattttccagaaaaatta
attcctctttttataaataatattatcaataataagcctttgcctgtttatggagatggc
aattatacgcgcgattggctttttgtggaagatcatgcgattgcaatagatttagttttt
catgaaggaaaaaatcatgaaacctacaacattggaggttttaacgaatggaagaacata
gatttagtcaagttattgtgccaaattatggatcagaaattaggtagaaatgaaggagct
tcgcaagaattgattacttatgtgaaagaccgaccgggacatgatttacgttatgccatt
gatgcttcaaaaattaatacagaattaggatggaaaccatctgttacttttgaagaaggt
ttagaaaaaacaattaattggtatttgaataacgaagaatggctacaaaatgtaacttct
ggttcttataaggattactatcaaaaacaatactcttaa
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