Flavobacterium collinsii: TRV642_0356
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Entry
TRV642_0356 CDS
T08703
Symbol
vipB
Name
(GenBank) Vi polysaccharide biosynthesis protein VipB/TviC
KO
K02473
UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:
5.1.3.7
5.1.3.-]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs00520
Amino sugar and nucleotide sugar metabolism
fcs00541
O-Antigen nucleotide sugar biosynthesis
fcs01100
Metabolic pathways
fcs01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
TRV642_0356 (vipB)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
TRV642_0356 (vipB)
Enzymes [BR:
fcs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.7 UDP-N-acetylglucosamine 4-epimerase
TRV642_0356 (vipB)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_10
NAD_binding_4
RmlD_sub_bind
NmrA
adh_short
Motif
Other DBs
NCBI-ProteinID:
CAI2765432
UniProt:
A0A9W4X1P8
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All DBs
Position
TRV642:complement(373051..374034)
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AA seq
327 aa
AA seq
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MSTSKQHTILITGGAGFIGSNLSEYFLGLGHKVVCLDNFSTGHRHNLKDFISNPDFRLIE
GDIRNIADCVLAVEEVDYVLHQAALGSVPRSINDPITTNDVNVSGFLNMLVAARDAKVKR
FIYAASSSTYGDSQGLPKVEEVIGKPLSPYAITKYVNELYAEIFSKTYGLETIGLRYFNV
FGRKQDPNGAYAAVIPKFVMQLMKYESPVINGDGNYSRDFTYIDNVIQMNELAMTSQNPA
AINTVYNTAFGDRNSLNDLIGYLKEYLSEFDSKIRDVEIVYGVNRAGDIPHSLASIDKAR
TVLGYDPQYSLQDGLKEAVSWYWNNLK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtacatcaaaacaacatacaattttgattacaggtggagctggatttatcggatca
aatttatcggagtattttttaggacttggtcataaagtggtttgtctggataatttttcg
acaggtcatcgtcataatttaaaggatttcatttcaaatcctgattttagattaatagaa
ggagatatccgaaatatagccgattgtgttttggcagttgaagaagtagattatgttttg
caccaggcagctttaggttcagttccgagatcaattaatgatcctattacaacaaatgac
gtaaatgtttctggctttttaaatatgttagtagcggcccgtgatgcaaaagttaaaagg
tttatatatgcggcaagttcatcaacgtatggagattctcaaggattgccaaaggtcgaa
gaagttataggtaaaccgctatcgccatatgcgatcacaaagtatgtaaatgaattgtat
gctgagatttttagtaaaacatatggattagaaactattggattgcgatattttaatgtt
tttggaagaaaacaagatcctaatggagcctatgcagctgtaattccgaagtttgtaatg
cagctcatgaaatatgaaagcccagtgataaatggtgatgggaattattctcgtgatttt
acttatatcgataatgtaattcagatgaacgaattggcaatgacaagccaaaatcctgct
gcaattaatacagtttacaatacagcctttggtgatcgaaattctttgaatgatttgatc
ggatatttaaaagagtatttgagtgaatttgattcaaaaattagagatgtagaaattgtt
tacggagtcaatcgggcgggagatattccgcattcattagcaagtatcgacaaagcgagg
actgtattagggtatgatccacaatattctttacaagatggtttaaaagaggcggtaagc
tggtattggaataatttaaaataa
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