Flavobacterium collinsii: TRV642_0412
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Entry
TRV642_0412 CDS
T08703
Symbol
rarA
Name
(GenBank) Replication-associated recombination protein A
KO
K07478
putative ATPase
Organism
fcs
Flavobacterium collinsii
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
TRV642_0412 (rarA)
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Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Sigma54_activat
Mg_chelatase
Sigma54_activ_2
AAA_5
MCM
AAA_14
AAA_22
nSTAND3
AAA_16
AAA_18
DNA_pol3_delta2
AAA_3
IstB_IS21
AAA_28
AAA_2
AAA_30
Parvo_NS1
RNA_helicase
ATP-synt_ab
AAA_24
ABC_tran
AAA_33
AAA_17
NACHT
AAA_7
NPHP3_N
Viral_helicase1
SKI
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CAI2765484
UniProt:
A0A9W4TCM7
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All DBs
Position
TRV642:424112..425389
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AA seq
425 aa
AA seq
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MEAPLAERIRPQHLEDYISQSHLVGPNGSLTQQISKGIIPSLIFWGPPGTGKTTLAQIIA
QESKRPFYILSAINSGVKDIRDVIEKAKQSGGLFTAKNPILFIDEIHRFSKSQQDSLLAA
VEKGWITLVGATTENPSFEVIPALLSRCQVYVLNAFTKADLEALLHRAIKTDIYLASKNI
TLKETEALLRLSGGDGRKLLNIFELVINASAGDEIIITNDRVFELVQQNTVLYDKSGEQH
YDIVSAFIKSIRGSDPNGAVYWLARMIEGGEDVKFIARRMLILSSEDIGNANPTAFIMAN
NTFQAVTTIGYPESRIILSQCAIYLATSPKSNASYMAIGNAQQLVKQTGDLPVPIHLRNA
PTKLMKELGYGDDYKYSHDYANNFAEQEFLPDAIKETVLYNPGHNSRENSNREFLKNRWK
DKYGY
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaagcacctttagccgagcgtattcgcccacaacatttagaagattatatcagtcag
agtcacttggttggaccaaatggatccttaacgcagcaaatttcgaaaggaatcattccg
tcattaattttctggggaccaccgggaactggaaaaactactttggcgcaaatcattgca
caagaatcaaaacgacctttttatatactgagtgccataaattcaggtgtaaaagacatt
cgtgatgtaatcgaaaaagccaaacaaagcggtggactgtttacagctaaaaatcctatt
ttatttattgacgagatacatcgtttcagcaagtcacaacaagattcgcttttggctgct
gtcgaaaaaggttggattacacttgttggcgcgacgacagagaacccaagttttgaggtc
attcctgcattattgtcacgttgccaggtttacgtacttaatgcgtttacaaaagctgat
ctagaggctctactgcaccgtgctataaaaacagacatttatttagcttctaaaaacatt
accttaaaagaaactgaggctttgctccgactttctggaggagatggacgaaaattgctc
aatatttttgaacttgtcattaatgcatcggcaggtgatgaaataattattaccaacgat
cgtgttttcgaattggttcaacaaaataccgttttatatgataaaagcggagaacagcat
tatgatattgtttctgcctttataaaatctattcgcggcagtgatccgaatggggctgtt
tattggctggccagaatgattgaaggtggtgaagatgtgaaatttattgcccgaagaatg
cttattctctccagtgaggatattggaaatgctaatccgactgcctttatcatggctaac
aatacctttcaggcagtaacgacaattggctatccggaaagcagaattatactgagtcaa
tgtgctatttatctggcgacctctcctaaaagtaatgcctcgtacatggctattggcaat
gcacagcaattggtaaaacaaactggagatttaccagttcctattcacttaagaaatgca
ccaaccaagcttatgaaagagctcggttatggcgatgattataaatattcgcacgattat
gccaataattttgctgagcaggaatttttacctgatgctataaaagaaacggttctttac
aatcctgggcacaattcaagagagaatagcaaccgcgaatttttaaagaaccgctggaaa
gataaatacggctattaa
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