Flavobacterium collinsii: TRV642_0627
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Entry
TRV642_0627 CDS
T08703
Name
(GenBank) putative enzyme
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs00540
Lipopolysaccharide biosynthesis
fcs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
TRV642_0627
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
fcs01005
]
TRV642_0627
Lipopolysaccharide biosynthesis proteins [BR:
fcs01005
]
Lipid A
TRV642_0627
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
CAI2765673
UniProt:
A0A9W4X290
LinkDB
All DBs
Position
TRV642:complement(647493..648449)
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AA seq
318 aa
AA seq
DB search
MRTKKAFFLYGLLITALTFGQTKTTEIGLITDNDLYTSSKNDMYYTNGIELFYRFLSKNN
NEKISKKITEFRIGQYIYNPRFINEAAVTINDRPFTGYLFAEAGRSFFYKSESVLKTDFQ
LGFMGPNAMGRETQESFHHLIGYKTVYGWENQLHNAFAIQAHVMYSKKLFLSKHNNFIDL
HFQSEANVGTIFTGVSTGLLTRIGFKKLLPIYDSNMHDASVSDVPQYDVREFYFYAMPSV
NYQFYDATIEGSMFSNTSPLTFDLEPLRFNAEAGIKLRHNNFNMSYSFMYRGRELKDPDT
NTNSGYFYGSIRFGYLLN
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactaaaaaagccttttttttatacgggttgttgataacagctttgacttttgga
cagacaaaaaccacagaaattgggttaattacagataacgatttatacacttcgtctaaa
aacgatatgtattacaccaatggaattgagcttttctatcgttttttatcgaaaaacaac
aacgaaaaaataagtaaaaaaattaccgagtttcgtattggacagtatatttataatccg
agatttataaacgaggcggcggtaaccattaatgatcgcccttttaccggttatcttttt
gctgaagcaggacgaagttttttctataaaagcgaatcggttttaaaaacagattttcag
ctcggttttatggggcctaatgccatgggaagagaaactcaggaaagtttccatcatctt
attgggtacaaaacggtgtatggttgggaaaaccagctgcacaacgcattcgctattcag
gcgcatgtaatgtattcgaagaaattatttctttcgaagcacaataattttatcgatctt
cactttcagtcggaagcaaatgtagggactatttttacaggtgtttcaacaggattgctg
actagaattggtttcaaaaaattacttccaatttatgattctaatatgcatgacgcttct
gtaagcgatgtaccgcaatatgatgttcgcgaattttatttctatgcgatgccaagtgtc
aattaccagttttatgatgctacaatcgaaggcagtatgtttagcaataccagtccgttg
acatttgatttggaaccacttcgtttcaatgctgaggcgggtataaaattacgccacaat
aacttcaatatgtcgtattcgtttatgtaccgaggcagagaattaaaagatccggatacc
aataccaattcgggatatttttacgggtcgattcgatttgggtatttgttgaattag
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