Flavobacterium collinsii: TRV642_0712
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Entry
TRV642_0712 CDS
T08703
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
fcs
Flavobacterium collinsii
Pathway
fcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TRV642_0712 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcs03400
]
TRV642_0712 (recO)
DNA repair and recombination proteins [BR:
fcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TRV642_0712 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TRV642_0712 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
CAI2765750
UniProt:
A0A9W4X8M3
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All DBs
Position
TRV642:complement(739350..740063)
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AA seq
237 aa
AA seq
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MLIKTKAIVISSLKFQEKSLIVKCFTLSNGLKSYFVRDAFSSRKASQKIAYFQPLSILEI
EAMHKNKGTLETFKEIKTAVPFQSIHTDLVKSTMVMFLSEMLHYSIQEEEKNESFFVFLE
TALTWLDHHDEISNFHLILLLEATKYLGFYPDISEVEFSYFEMIDGVFTLFHGANTLTEH
ETNLFKKLIDLKFENDQKVFHVAERQVLLKVLIDYYGFHLEGFKRPKSLDVLKEIFS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
ttgttaatcaaaaccaaagcaatagtaatttcatcgttaaaatttcaggagaaaagtttg
attgtaaagtgttttactctttcaaacggcctgaaatcttattttgtgcgtgatgctttt
tcaagtcggaaagcaagtcagaaaattgcctattttcagcctttgtctattcttgaaatt
gaggcgatgcataagaataaaggaactttggagacttttaaagaaataaaaacagcagtg
ccttttcagagtattcataccgatcttgtgaaaagtactatggttatgtttttgtctgag
atgctccattattctattcaggaagaggagaaaaacgaatcattttttgtgttcttagag
acagcactgacctggttggatcatcatgatgaaatttcgaattttcatttgattctgctt
ttggaagctacaaaatacctgggcttttatccggatatttcagaagtcgaattttcttat
tttgaaatgattgacggcgtttttactttgtttcatggggcgaatactttgacagaacat
gaaacaaatctttttaagaaactgatagatcttaaattcgaaaacgatcagaaggttttt
cacgtagctgaaagacaagtattactgaaggttttaattgattattatggttttcatttg
gagggttttaaaagaccaaaatcacttgatgttttgaaagagatattttcttaa
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