Flavobacterium collinsii: TRV642_1233
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Entry
TRV642_1233 CDS
T08703
Name
(GenBank) Octaprenyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs00900
Terpenoid backbone biosynthesis
fcs01100
Metabolic pathways
fcs01110
Biosynthesis of secondary metabolites
Module
fcs_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
TRV642_1233
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
fcs01006
]
TRV642_1233
Enzymes [BR:
fcs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
TRV642_1233
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
TRV642_1233
2.5.1.29 geranylgeranyl diphosphate synthase
TRV642_1233
Prenyltransferases [BR:
fcs01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
TRV642_1233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CAI2766237
UniProt:
A0A9W4THR7
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All DBs
Position
TRV642:complement(1300710..1301726)
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AA seq
338 aa
AA seq
DB search
MNCIFGLRKSEFHFMHDISQYQDFFISYLKKQSIQKEPQNLYAPIEYILGLGGKRIRPVL
TLMAAEVFNTSYIKALPAAMAVEVFHNFSLVHDDIMDDAPLRRGQETVHEKWDLNTGILS
GDAMLILAYQYFEQYEPNVFRNLAKLFSKTALEVCEGQQWDVDFEKRNDVTIPEYLKMIE
YKTAVLVAAAMKMGAIVAETSEKEGDLIYDFGLNLGLAFQLQDDYLDAFGDPETFGKQVG
GDIIENKKTYLYLKAREFSSPEKASELEQLFSLQLEDNTDKIATAKTIFNESGASKATQD
AIEMYTFKAFETLEKMDINAEKKDILRTFGENLMGRKV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtatctttgggcttcgcaaatcagaatttcattttatgcacgatattagtcag
taccaggatttttttattagttatttaaaaaaacaaagcatacagaaagaaccccaaaat
ctttacgctcctattgaatacattctcggccttggcggaaaacgaatacgtcccgtactt
actttgatggccgcagaagtctttaacacttcttatataaaagcacttccggctgcgatg
gctgttgaagtttttcataatttctcgcttgtacatgatgacattatggatgatgcacct
ttgcgcagaggacaggaaacggttcatgaaaaatgggacctcaacaccggtattctttcc
ggcgatgcgatgcttattctcgcttatcagtattttgaacaatatgaaccaaatgttttc
agaaatctggcaaaactgttcagcaaaactgctcttgaagtttgtgaagggcaacaatgg
gatgttgattttgaaaaaagaaacgatgttacgattccggaatatcttaaaatgatcgaa
tacaaaacagctgttctggttgctgcagccatgaaaatgggagccatcgtagccgaaaca
tctgaaaaagaaggcgatttaatttatgatttcggattgaatttagggcttgctttccag
cttcaggacgattatctggatgcttttggagatccggaaaccttcggaaaacaagttgga
ggagatattatcgaaaacaaaaaaacatatttatacctcaaagcaagagaattttcttct
cctgaaaaagcttcagaattagagcaattattcagcctacaattagaagacaataccgat
aaaatagcgactgcaaaaaccatttttaatgaatcaggagcttcaaaagcaacgcaggat
gctatagagatgtatacttttaaagcttttgaaactttagaaaaaatggatattaatgcc
gaaaagaaagatattcttagaacttttggcgagaatttaatgggtagaaaagtttaa
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