Flavobacterium collinsii: TRV642_1562
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Entry
TRV642_1562 CDS
T08703
Name
(GenBank) Cytoplasmic axial filament protein CafA and Ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
fcs
Flavobacterium collinsii
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcs03019
]
TRV642_1562
03009 Ribosome biogenesis [BR:
fcs03009
]
TRV642_1562
Messenger RNA biogenesis [BR:
fcs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TRV642_1562
Ribosome biogenesis [BR:
fcs03009
]
Prokaryotic type
rRNA processing factors
TRV642_1562
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DUF6305
Motif
Other DBs
NCBI-ProteinID:
CAI2766513
UniProt:
A0A9W4X308
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All DBs
Position
TRV642:complement(1656883..1658427)
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AA seq
514 aa
AA seq
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MNKELIIRSSSEAVDFALLKDGKLIELHKEEEKSNFQVGDIFIAKIRKPVAGLNAAFVNV
GFEKDAFLHYHDLGPNLASQLKFIKLVSAGKIKDFSLKTFQFEKEIDKDGIITDILSANQ
SVLVQVVKEPISTKGPRISAELSLAGRFIVLVPFSDRVSISQKIEDKKEKDRLKKLVLSI
KPKGFGVIVRTVAEGKNVAELEKDLQNLLGRWTAMCKKLPTAHHPSKVLGELNRASSILR
DVFNDTFSGIQIDDEELYHQTKEYLQEIAPSKQSIVKFYQSNDTPIFEKYNIERQIKTSF
GRTVSMSKGAYLIIEHTEALHVIDVNSGNRSNKATNQEDTAMEVNMIAAAEIARQLRLRD
MGGIIVVDFIDMSNPENRKVLFDFLREEMSDDKAKHKILPPSKFGLVQITRQRVRPEVNI
KTREEDPNNEHGEIEAPILIIDKISSDLDRILKTHKGVVLNVHPFVAAYLSKGFPSLRSK
WFFEHKKWVKIIPRDAYTYLEYHFYDKKGNVISE
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagaattaatcattagatctagttctgaagccgtagattttgccttattaaaa
gatggaaaactaattgaattacacaaagaagaagagaaaagcaattttcaggttggtgat
atttttatcgccaagatacgaaaaccagttgctggacttaatgctgcttttgtaaatgta
ggcttcgaaaaagatgcctttttacattatcacgatttaggacctaacttagcttctcaa
ctgaaattcataaaacttgtaagcgcaggtaaaataaaagatttctccctaaaaaccttt
cagtttgaaaaagagattgacaaagatggcatcattactgatattttaagtgccaatcaa
tctgttttagttcaagttgtaaaagaacctatatcgaccaaaggcccaagaataagcgct
gagctttcattggcaggaagatttattgttctcgttccgttttctgaccgtgtttctatt
tctcaaaaaatagaagacaaaaaagaaaaggatcgtctaaaaaaacttgttctatcgatc
aaacctaaaggatttggtgttattgttcgcacagtagccgaaggcaaaaacgtagccgaa
ttagaaaaagatttgcagaacctgcttggcagatggactgcaatgtgtaaaaaattacca
actgctcatcatccctcaaaagtattaggagaactcaacagagcttcttcaatattaaga
gatgtattcaatgatacctttagcggtattcaaatagatgacgaagagttgtaccatcaa
acgaaggaatatctgcaagaaattgcaccttcaaaacaatcgattgttaagttttatcaa
tcaaatgacactccaatttttgagaaatacaatatagagagacaaatcaaaacttcattt
ggaagaaccgtctccatgagtaaaggtgcttatcttatcatcgaacacactgaagctctt
cacgttatagacgtaaacagcggaaatcgttcgaataaagcaaccaaccaggaagacact
gccatggaggtaaatatgattgccgccgccgaaattgccagacaacttcgtttgcgtgat
atgggtggaataatcgtagttgattttatcgatatgtctaatcctgaaaacaggaaggtt
ttgttcgacttcttgcgagaagaaatgagcgacgataaagcaaagcataaaatcttaccg
cctagtaaatttggtttagttcaaattaccagacaacgcgtaagaccagaagttaatatt
aaaactagagaagaagatccaaacaatgaacatggcgaaattgaagcgccaattttaatc
attgataaaatctcatctgatttagatagaatcttaaaaacccacaagggtgttgtactt
aatgtacatccgtttgtggctgcatacctcagcaaaggttttccatcattacgttcaaaa
tggttttttgaacataagaaatgggtgaaaatcatacctcgtgacgcttacacgtactta
gaataccatttctatgataaaaaaggaaatgttatttcagaataa
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