Flavobacterium collinsii: TRV642_1640
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Entry
TRV642_1640 CDS
T08703
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs00730
Thiamine metabolism
fcs01100
Metabolic pathways
fcs01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
TRV642_1640 (thiC)
Enzymes [BR:
fcs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
TRV642_1640 (thiC)
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CAI2766588
UniProt:
A0A9W4X334
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Position
TRV642:complement(1749192..1751015)
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AA seq
607 aa
AA seq
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MTTEEQISRTPFPNSQKVYVSGEIHPIKVAMREVLLSDTKLSNGGIEKNPPVTVYDTSGP
YTDPKIEIDIRKGLPRLREQWILDRNDVEILSEITSDYGQSRLKDESLNHLRFEYLHQPK
RAKNGANVTQLYYAKQGIITPEMEYIAIRENQRIELLNEQTKAMQCQHGGHSFGANTPKS
KITPEFVRSEVACGRAIIPNNINHPESEPMIVGRNFLVKINANIGNSAVTSSIEEEVEKA
VWACRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVKGIAEDLTWEVFR
DTLIEQAEQGVSYFTIHAGVLLRYIHLTADRVTGIVSRGGSIMAKWCLFHHKENFLYTHF
EEICAIMKQYDVAFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWKHDVQVFIEGPG
HVPMHMIKENMDKQLEHCHEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYGCAMLCYV
TPKEHLGLPNKKDVKDGVITYKISAHAADLAKGHPGAQYRDNALSKARFEFRWEDQFNLS
LDPDTAREFHDETLPADGAKVAHFCSMCGPKFCSMKISQEIRDVAAAEKGMQEKSEEFIE
QGKEIYI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgactacagaagaacaaatttccagaactccatttcctaactcccaaaaagtgtatgta
agtggtgaaatccatcctatcaaggtggccatgcgcgaggttctgctgagcgacactaaa
ctttcaaacggcggaatcgaaaaaaatcctcccgtaacggtttatgatacttccggtcca
tataccgatcccaaaattgaaattgacattcgaaaaggactcccgagattaagagagcaa
tggattttagatcgtaatgatgtcgaaattctaagtgaaatcacttctgattatggacaa
agccgattgaaagacgaaagtttaaatcatcttcgatttgaatatttgcatcagcccaaa
agagccaaaaacggagccaacgtgacacaattgtattatgccaaacaaggcattatcact
cctgaaatggaatatattgctattcgtgaaaatcaacgaatagaacttctaaacgaacaa
accaaagccatgcaatgccagcatggtggtcatagttttggagccaatactcccaaaagc
aaaatcactcccgaatttgttcgcagcgaagtagcttgcggaagagccattatccctaac
aacattaatcatcccgaaagtgaaccgatgattgtcggacgcaactttttggtaaaaata
aatgccaacattggtaatagcgctgtgacttcgagcattgaagaagaagttgaaaaagca
gtctgggcttgccgttggggcgccgataccattatggatttatcaacaggcaaaaacatt
catgaaaccagagaatggatcattcgcaactctcctgtacccattggtactgtaccaatc
taccaggctctggaaaaagtaaaaggaattgccgaagacctaacctgggaagttttccgt
gatactttaatcgaacaggcagaacaaggtgtttcttattttacgattcatgccggagta
ctgttacgctacattcatttaacagccgacagggttaccggaattgtttctcgtggtgga
tctatcatggcaaaatggtgcttgtttcatcataaagaaaacttcttatacactcatttt
gaagagatctgtgcaatcatgaagcaatatgatgttgctttttctctaggagatggttta
cgtccgggttctattgctgatgccaatgatgccgctcaatttgctgaattggaaactttg
ggagaattaactaaaattgcctggaaacacgatgttcaagttttcattgaaggtcccggt
cacgttcctatgcacatgatcaaggagaatatggacaaacaactggaacattgtcatgaa
gctcctttttatactttaggccctctaacaacggacattgcaccaggttacgatcacatt
acctctgccattggagcagcaatgattggctggtatggttgtgcgatgctatgttatgtt
actccaaaggaacacctcggcttacctaataaaaaagatgtaaaagatggtgtgatcacc
tataaaatctccgcacatgccgccgatctggctaaaggccatccgggagcacaataccgc
gacaatgccttgagcaaagctcgttttgaattccgctgggaagatcagttcaacttatca
ctcgatccagatactgcaagagagtttcatgatgaaacccttcctgctgacggtgcaaaa
gtcgcccatttctgttcgatgtgtggtcctaaattctgttccatgaagatttctcaggaa
attcgtgacgtagctgctgctgaaaaaggcatgcaggaaaaatcggaagagtttattgag
caggggaaagagatttatatctaa
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