Flavobacterium collinsii: TRV642_1654
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Entry
TRV642_1654 CDS
T08703
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs03030
DNA replication
fcs03410
Base excision repair
fcs03420
Nucleotide excision repair
fcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRV642_1654 (polA)
03410 Base excision repair
TRV642_1654 (polA)
03420 Nucleotide excision repair
TRV642_1654 (polA)
03440 Homologous recombination
TRV642_1654 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcs03032
]
TRV642_1654 (polA)
03400 DNA repair and recombination proteins [BR:
fcs03400
]
TRV642_1654 (polA)
Enzymes [BR:
fcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TRV642_1654 (polA)
DNA replication proteins [BR:
fcs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TRV642_1654 (polA)
DNA repair and recombination proteins [BR:
fcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TRV642_1654 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TRV642_1654 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
RNase_H_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAI2766601
UniProt:
A0A9W4TH17
LinkDB
All DBs
Position
TRV642:complement(1762538..1765384)
Genome browser
AA seq
948 aa
AA seq
DB search
MSSQKRLFLLDAYALIFRGYYAFIKNPRINSKGMDTSAIMGFMNSLLDVIKREKPDHLAV
AFDKGGSQLRNELFPEYKANRDVTPEAIKIAVPYICELLKAMHIPIIEVSGFEADDLIGT
IAKQAEKENYKVFMVTPDKDFAQLVSENIFMYKPARMGNGIEIWGVPEVLAKFEIERPEQ
VIDFLGMMGDAADNIPGLPGVGEVTAKKLLKEFGTMENLLANTDKLKGKMKENIEANKEK
GLLSKKLATILLDCPVTFNEDDYELVRPDIEKTDAIFQELEFRRMAEQFDNLFKTGDGNE
SAASAPVSDAKLYKKPQPKNEDQFDLFGGGSTEENAEATRTSFYNTLENTPHSYQAIQGD
LGIKLLLQNLQNQTSVCFDTETTGLDALHAELVGIAFSYEKGKAFYVPFPENQEEAQTLI
EKFRPFFENENIEKIGQNLKYDLKILSNYDITVKGKLFDTMIAHYLINPDMRHNMDILSE
TYLKYAPKPIEELIGKKGKNQITMRDVSLEDIKEYAAEDADITLQLKEIFTTELDKTETK
KLFDEIEIPLVSVLAAMETEGIRLDVEFLNAMSKEMDVEIKSLEHKIYETAGEKFNLASP
KQLGDILFDKLKIGGAKQKKTKTGQYATGEEVLTYLANDNPIVKQILDWRQMVKLQSTYI
LALPEQVDKKTLRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQIRKAFVARDENYT
LISADYSQIELRIIAALSGEENMIAAFKNGEDIHKATAAKVFDVPLDEVSREQRSNAKTV
NFGIIYGVSAFGLSNQTSLSRSESAALIEAYYKTYPRLKSYISEQIEFAREKGYVQTILG
RRRYLKDINSANAIVRSAAERNAVNAPIQGSAADVIKIAMINIHKKLKEENWKSKMLLQV
HDELVFDVHNDELEKIQPMIKHEMENAFTMAVPLEVELGMGKDWLAAH
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacaaaaacgcctttttttacttgatgcttacgctttaatatttcgcggctac
tacgccttcataaaaaacccaaggatcaactccaaaggaatggatacatcagcgatcatg
ggattcatgaattcgcttttagatgttatcaaacgtgaaaaaccggatcatttggctgta
gcttttgataaaggcggaagccaattgcgaaacgaattattccctgaatacaaggctaat
cgcgatgtgacgcctgaagccattaaaattgctgttccttatatctgcgaattgttaaaa
gccatgcacattccgattattgaagtgtcaggttttgaagccgacgatttaattggaacg
attgccaaacaagccgagaaagaaaattataaagtttttatggtaactccggataaggat
tttgcgcaattagtttcggagaacatctttatgtacaaacctgcccgcatgggaaatgga
attgaaatttggggagttcctgaagtcttggcaaaattcgaaatcgagcgtccggaacaa
gtcatcgactttcttggaatgatgggtgatgccgccgataatattccgggacttccggga
gttggcgaagtaaccgccaaaaaactcctaaaagaatttggaacgatggaaaacctatta
gccaatacagataagctaaaaggaaaaatgaaagagaatatcgaggccaataaagaaaaa
ggattgttgtctaaaaaattggcaaccattttattagactgcccggtaacctttaacgaa
gacgactacgagttagttcgacctgatattgaaaaaaccgatgctatttttcaggagctt
gagttcagacgaatggcagagcaatttgacaatttgtttaaaacaggcgacgggaacgaa
tcagcggcttcagctccggtttctgatgccaaattatataaaaaaccacaacctaaaaac
gaagatcagtttgatctttttggaggtggttctaccgaagaaaatgccgaagcaaccaga
acttctttttacaatactttagaaaacacacctcactcctatcaggccattcagggagat
cttggtataaaactgcttttgcaaaacctgcaaaaccagacttctgtttgttttgacacc
gaaactacaggtttagatgctttgcatgccgagttggtaggtatcgctttctcttacgaa
aaaggaaaagctttttatgtgccgtttccggaaaatcaggaagaagctcagactttaatt
gaaaaattcagacctttctttgagaatgaaaatatcgaaaaaataggccaaaatttaaaa
tacgatttgaaaatcctttccaattatgatattaccgtaaaaggaaagctttttgatacc
atgattgcgcactatctaatcaatccggatatgcgtcataatatggatattttatcagaa
acctatttgaaatatgccccaaaaccaattgaagaattgattggcaaaaagggaaaaaat
caaattacaatgcgtgatgtgtctcttgaagacatcaaggaatatgctgccgaagatgct
gatatcactttacagttaaaagaaatttttactacagaattagacaaaaccgagactaaa
aaactgtttgatgaaattgaaataccattagtaagcgttttagctgctatggagacagaa
ggaattcgtctggatgtcgaatttttaaacgcaatgtctaaagaaatggatgttgaaatc
aaatctttagaacacaaaatatacgaaactgcaggagagaaattcaatttagcttcccct
aaacagttaggtgatattttatttgataaacttaaaattggcggagctaaacagaagaaa
accaaaaccggacaatatgcaaccggcgaggaggttttgacttatttggctaacgacaat
ccaattgtaaaacaaattctggactggcgtcagatggtgaaattgcaaagtacttatata
ctggctttaccggaacaagtagacaaaaaaacattacgcgttcataccgattatatgcag
accgttgctgctacaggacgcttgagttctaacaatccaaacttacaaaacattccgatt
cgtaccgaaagaggacgtcaaattcgtaaagcttttgtagcacgcgatgaaaactatact
ttaatctctgccgattattcgcagatagaattaagaattattgccgctttgagtggtgaa
gaaaatatgattgccgcttttaaaaatggagaagacattcacaaagcaactgctgccaaa
gtttttgatgtgcctttggatgaagtttcccgcgaacaaagaagcaacgccaaaaccgtt
aacttcgggattatttatggtgtttctgcctttggattgagtaatcagacttctttatcc
cgcagcgaaagtgctgcattgattgaggcgtattataaaacctacccaagactgaaatct
tatatttctgaacaaatagaatttgcccgtgaaaaaggatatgtacaaaccatcttaggc
cgtcgtcgttatttaaaagacattaactcagcgaatgccatagttagaagtgccgccgaa
cgaaatgccgtaaatgcacctatccagggaagcgctgccgatgtgatcaaaattgccatg
atcaacattcataaaaaactaaaagaagaaaattggaaatctaagatgctgcttcaggtg
catgatgagcttgtgttcgatgttcacaacgacgaactcgagaagattcagcctatgatc
aaacacgaaatggaaaatgcctttacgatggcagttcctttagaagttgaactcggaatg
ggtaaagattggttggccgcacattaa
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