Flavobacterium collinsii: TRV642_1796
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Entry
TRV642_1796 CDS
T08703
Symbol
rlhA
Name
(GenBank) 23S rRNA 5-hydroxycytidine C2501 synthase
KO
K24847
23S rRNA 5-hydroxycytidine C2501 synthase
Organism
fcs
Flavobacterium collinsii
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fcs01002
]
TRV642_1796 (rlhA)
Peptidases and inhibitors [BR:
fcs01002
]
Peptidases of unknown catalytic type
Family U32
TRV642_1796 (rlhA)
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Motif
Pfam:
Peptidase_U32
DUF3656
Ned1_M
Motif
Other DBs
NCBI-ProteinID:
CAI2766737
UniProt:
A0A9W4X2Y1
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Position
TRV642:complement(1944869..1946743)
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AA seq
624 aa
AA seq
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MKKKIEILAPARDLIGGMAAINSGADAVYIGAPQFGARSNANNSIEDVAALVQYAHLFNA
QVFVVMNTILYDNELETCRKMIWELYDIGVDALIIQDMAIMEMDLPPIVLHASTQANNRD
ADKIKFLKDAGIKRVVLARELNLHQIKTIYDEADVELEFFVTGALCVSFSGNCYMSVANG
ERSANRGSCAQNCRLPYNLIDGNGETLIKNSHLLSIKDLDISDQIPNLIEAGIVSFKIEG
RLKDVVYVKNNVSYLRQKLDSFLEGAGSDKYTKASSGKCTYTFDSSLNRTFNRGYTDYFV
NERHSSIGSWESPKSKGQYIGKLIRTVGNAYEIENGELLNNGDGLCFINENNEADGIYVN
KAENGKIYPNVLKEVKDGTFIYRNNDAAFIKVVEREDSAIRKLSTTLLLTETETGFELIA
TDEDGNVSIVTLEHAKEQTKTGESIEENIKTQLAKTGFTPYTADEINVMFSQNWFLPISK
INEMRRTVYDQLTAIRLANYKREEHQLVKTSHPYPETKLDFMYNVSNKTARKFYERHGVT
EIEKAFELQWDPGKSRVMTTKYCIKYELKKCPIHQKDIVGVKVKEPLVLKQGELEYKLKF
NCKPCEMEIWEKDAEFEIEEDHFH
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagattgaaatattagctcctgccagggatttaattggaggaatggcagcc
ataaatagtggtgccgatgctgtttatattggtgcaccacaatttggagcacgctcgaat
gccaacaattctattgaagatgtagctgcattggtacaatatgcacacctttttaatgca
caggtctttgtggttatgaataccattttgtacgataacgaactggaaacctgtcgcaaa
atgatttgggaattgtacgacattggtgttgacgccttaatcattcaggatatggcgatt
atggaaatggacttacctcctatcgtacttcatgccagtacacaagccaataatcgtgat
gccgataagataaaattcttaaaagatgccggaattaaacgtgtggttttagcccgcgaa
ttgaacttgcatcaaattaaaacgatttatgacgaagctgatgttgaactagaatttttt
gtaaccggagctttatgcgtttctttcagtggaaactgctatatgagtgtggccaacgga
gaacgaagtgccaatcgtggttcttgcgcacaaaactgtcgtttaccatataacttaata
gacggaaacggagaaactttaatcaaaaacagtcacttactttctataaaagatttagac
atctcagatcagattccaaacttaattgaagcaggaatcgtttctttcaaaattgaagga
agactgaaagatgtcgtttacgtaaaaaacaacgtttcttatttacgccaaaaattagac
agctttttagaaggcgcgggaagtgataaatataccaaagcttcttccggaaaatgcacc
tatacctttgattcttctttaaacagaactttcaaccgtggttatacagattatttcgta
aacgaaagacacagctctattggttcttgggaaagcccaaaatcaaaaggtcaatatatt
ggaaaattaatccgaactgttggaaacgcatacgaaatcgaaaacggtgaactactgaat
aatggtgacggactttgttttatcaacgaaaacaatgaagccgacggaatctatgtaaac
aaagccgaaaacggaaaaatttatccaaacgttttaaaagaagtaaaagacggaactttt
atttaccgtaacaacgacgctgctttcattaaagttgtagagagagaagacagtgctatt
cgaaagctaagtacaactttattgcttaccgaaactgaaacaggcttcgaattaatcgca
accgatgaagacggaaatgtaagtattgttacccttgagcatgcaaaagagcaaactaaa
actggcgaatcaatcgaagaaaacatcaaaacacaattggccaaaacaggttttacacct
tataccgctgatgaaattaatgtaatgttttctcaaaactggttccttcctatttcaaaa
attaacgaaatgagaagaaccgtttacgatcagttaacagcaattcgtctggcaaattac
aaacgcgaagagcaccagttagttaaaacatcacatccttatccggaaactaaattggat
ttcatgtacaatgtttccaacaaaacggcccgtaaattctacgaacgtcatggcgttacc
gaaatcgaaaaagcatttgaactacagtgggatccaggaaaatcgcgtgtgatgacgacc
aaatattgcatcaaatacgaattaaaaaaatgtccgatacaccaaaaagatatagttggt
gttaaggtaaaagaaccattagtattaaagcagggtgaattagagtacaaactaaaattc
aattgtaaaccttgtgaaatggaaatctgggaaaaagatgcagaattcgaaatagaagaa
gatcattttcattaa
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