Flavobacterium collinsii: TRV642_1860
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Entry
TRV642_1860 CDS
T08703
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs00470
D-Amino acid metabolism
fcs00550
Peptidoglycan biosynthesis
fcs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TRV642_1860 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TRV642_1860 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fcs01011
]
TRV642_1860 (murD)
Enzymes [BR:
fcs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
TRV642_1860 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
fcs01011
]
Precursor biosynthesis
Amino acid ligase
TRV642_1860 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
CAI2766798
UniProt:
A0A9W4X301
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All DBs
Position
TRV642:2013387..2014718
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AA seq
443 aa
AA seq
DB search
MRLVVLGGGESGVGTAILGKKKGYDVFVSDFGKIKESYKEVLIINKIAWEEEQHTEDLIL
NADVVMKSPGIPEKSPIVKKLVAAGVKVISEIEFAKPFTEALTIGITGSNGKTTTTMLTH
YLLKSAGLNVGLGGNIGKSFAWQVAENKYDAYVLELSSFQLDGIIDYRPDIAIITNISPD
HLDRYEYKYENYINSKFRITMNQTESDYLIYDADDEAIAGWLKNNKTKAKLIPFSLTEKL
GEGASINNNKMEIKINQEEFTMETEHIALEGKHNMKNAMAASSVAKLMQIRNATIRESLS
NFQGVEHRLEKVLKIQNVQYINDSKATNVNATFFALDSMNVPTVWIVGGVDKGNDYNELM
SLVREKVKAIICLGIDNHKIINAFGNVVDIMVEVNNMNDAVKTAQRLTEKGDTVLLSPAC
ASFDLFESYEDRGRQFKQAVHNL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagattggtagtgttaggcggaggagaaagcggtgtaggtactgctattctcggaaag
aaaaaaggatacgatgtttttgtgtcggattttggaaagataaaagaaagttacaaagaa
gttcttatcattaataaaattgcctgggaagaagaacagcatacagaagacctgatttta
aatgccgatgtggtgatgaaaagtccagggattccggagaaatctcccatcgtaaaaaaa
ctggtagcagccggagtaaaagtaatttcggaaatagaatttgcaaaaccttttacggaa
gcattgactatcggaattacaggtagtaacggaaaaactaccacaacgatgctgacacat
tatttactgaagtcagcgggtttgaatgtagggctggggggaaacataggaaaaagtttt
gcctggcaggttgccgagaataaatacgatgcctatgtgcttgagctgagcagttttcag
cttgacggaattattgattacagaccggatattgcgattataaccaatattagtccggat
catttagaccgatacgaatataaatatgagaactatatcaattcgaagtttcgaataacg
atgaatcagaccgagagtgattatttgatttatgacgcagatgatgaggcgattgcagga
tggttgaagaacaacaaaacaaaagcaaaattaattcctttttcattgactgaaaaatta
ggtgaaggggcttctataaataacaacaaaatggaaataaagatcaaccaagaagagttt
acaatggaaacagaacacattgcgttagaaggaaaacataacatgaagaacgcaatggca
gcaagctctgtagcgaagttgatgcaaataagaaatgcaacaattcgcgaaagtttatct
aattttcaaggtgttgaacaccgtttagaaaaagtacttaaaattcagaatgtacaatac
atcaacgattcgaaagccacaaatgttaatgctactttctttgcgttagacagcatgaat
gttccaacagtttggatagtaggtggagttgataaaggaaacgattataacgaattgatg
tcgttagttcgtgaaaaagtaaaagctatcatttgtcttggaattgataatcataaaatc
atcaatgctttcggaaatgtggtggatatcatggtcgaagtaaataatatgaacgatgct
gtaaaaacagcacagcgtttaacagaaaaaggagatacggttttattgtctcctgcctgc
gcaagtttcgatttatttgaaagctacgaagacagaggtagacagtttaagcaagcggtg
cacaatttataa
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