Flavobacterium collinsii: TRV642_2106
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Entry
TRV642_2106 CDS
T08703
Symbol
amyS
Name
(GenBank) Alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs00500
Starch and sucrose metabolism
fcs01100
Metabolic pathways
fcs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
TRV642_2106 (amyS)
Enzymes [BR:
fcs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
TRV642_2106 (amyS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amy_C_pro
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
CAI2767020
UniProt:
A0A9W4TGB6
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All DBs
Position
TRV642:complement(2300487..2301929)
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AA seq
480 aa
AA seq
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MKKPILQLYLIAAITSFLGSCSQNETVETDSKAQSQQFEIINVTHHDGRPFSTGTSNSSL
TGKYVDNPGGGVMMQAFYWDVPSGGTWWNTVSSKVTAWSNAGIGSIWLPPASKAQNGAFS
MGYDPTDYFDFGDYNQNGSIETRFGSKAELVSLITNAHTENLKVYADIVINHNSGGQSEA
NPFTGTNTWTNFGGVASGKFTRNYNDFYKNSYGNNDEGAFGGFPDLCHANPHVQDWLWLR
ADGVGKYYKNTMKFDGWRFDYVKGFGAWVVNSWNANVGGFSVGELWDSNVNVLNDWANNA
NSSVFDFACYYKMNDAFDGNNLALLNDDMMWKRNPYKAVTFVTNHDTDEIWSKLLAYSYI
LTHEGYPTIFYRDYEEWLDKSKLNNLIWIHNNKATGTTSILYSDNDEYVARRNGYNGNPG
LVVYINNSDVWQERWVQTNWASTQIKDFTGNSSWYPTTQADKWVKIQCPPKGYSIWSVNQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaccaattctacaactttacctgattgcagcgattacttcatttttaggttca
tgttctcaaaatgaaacagttgaaacagattcaaaagctcagagtcagcaatttgaaatt
attaacgttacacatcatgacggaagacctttcagtaccggaacctcaaattcatcctta
accggaaaatacgtagacaatcctggtggcggagttatgatgcaggccttttactgggat
gttccgtccggaggaacctggtggaatacggtaagcagcaaagtaacagcctggtcgaat
gcaggaatcggctctatatggcttcctcctgcctctaaagcacaaaacggagctttctct
atgggatatgaccctacagattattttgattttggagattacaatcaaaatggttctata
gaaacccgatttggttcaaaagccgaattggtcagcttaattaccaatgcacatactgag
aatctaaaggtatatgcagatattgttatcaatcataatagtggcggacaatcagaagcc
aatccttttacgggaaccaatacctggactaattttggcggagtggcttccggaaagttt
acacgtaattataatgacttctacaagaacagttacggaaataacgacgaaggcgctttt
ggaggctttcctgatttatgccatgccaacccgcatgtacaggactggctgtggctaaga
gctgacggtgtgggtaaatattacaaaaatacgatgaagtttgacggctggaggttcgat
tacgtaaaaggctttggcgcctgggtagtaaactcctggaatgctaatgttggcggattt
tcggttggagaattatgggattctaatgtaaatgtgctaaatgactgggcaaacaacgcc
aacagttcggtttttgattttgcctgttattacaaaatgaatgatgcttttgacggaaac
aatctggcattactgaatgatgatatgatgtggaaaagaaacccttacaaagctgtaacc
tttgtaaccaatcacgatactgatgaaatctggagtaaattattagcgtattcctatata
ttgacacatgaaggttatccaactattttttacagagattatgaagaatggttagacaag
agcaaactaaacaatctgatctggattcataacaataaagcaaccggaacaacttcaatt
ttatattctgacaatgacgaatatgtagcacgaagaaatggttacaacggaaatcccgga
ttggttgtttacattaataactcagacgtctggcaggaaagatgggttcaaaccaattgg
gctagcactcaaatcaaagattttaccggaaattcaagctggtatccaacaactcaggcc
gataaatgggtaaaaatacaatgtcctccaaaaggatattcaatttggtctgttaaccaa
taa
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