Flavobacterium collinsii: TRV642_2315
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Entry
TRV642_2315 CDS
T08703
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs00300
Lysine biosynthesis
fcs00470
D-Amino acid metabolism
fcs01100
Metabolic pathways
fcs01110
Biosynthesis of secondary metabolites
fcs01120
Microbial metabolism in diverse environments
fcs01230
Biosynthesis of amino acids
Module
fcs_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TRV642_2315 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TRV642_2315 (lysA)
Enzymes [BR:
fcs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
TRV642_2315 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
2L_N_poxvirus
MC7
Motif
Other DBs
NCBI-ProteinID:
CAI2767197
UniProt:
A0A9W4XEH9
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All DBs
Position
TRV642:complement(2650355..2651647)
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AA seq
430 aa
AA seq
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MLFFNLKFVNRQKSNKFAENSLQMQAKDLLQLAEQFGSPLYVYDAEKIQSQYNRLTKAFS
KVENLRVNYAMKALSNVAILQLLKNMGSGLDTVSIQEVQLGLHAGYDPDKIFFTPNGVSL
EEIEEVAAMGVQINIDNLSILEQFGTKYPQIPVCIRINPHVMAGGNANISVGHIDSKFGI
SVHQIPHILRIVENTKMSIVGIHMHTGSDILDIEVFLYAAEILFDTAKHFKDLEFLDFGS
GFKVPYKKDDIETDIEELGKKLSKRFNSFCAEYGRDLTLIFEPGKFLVSEAGFFLAKVNV
VKQTTSTVFAGVDSGFNHLIRPMFYGSSHHIENISNPKGKERFYSVVGYICETDTFANNR
RISEITEGDILAFRNAGAYCFSMASNYNSRYKPAEVLWMNGKGILIRQHETFEDLLKNQI
PLPQEVAATV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
ttgttatttttcaatttaaaatttgtcaatcggcaaaagagtaataagtttgctgaaaat
agtttacagatgcaagcaaaagatttactgcagttagcagaacaatttggaagtccatta
tatgtatatgatgccgaaaaaatccaatctcagtacaacagattaaccaaagctttctct
aaggtggaaaacttaagagttaattatgccatgaaagcattatctaacgttgctattctt
cagttattaaagaacatggggtctggcctggatactgtatctattcaggaagttcaatta
ggacttcatgctggctatgatcctgacaaaattttctttacaccaaacggagtttctctt
gaagaaatcgaagaagttgccgcaatgggtgtacaaatcaatattgacaacttatctatt
ctggagcaattcggaacaaaatatccacaaattccggtatgtattcgtatcaatccgcac
gtaatggcgggtggaaatgctaatatttcggtaggacatatcgatagtaaattcggaatc
tctgttcaccaaattccgcatatcttgcgaattgtagagaacacaaaaatgagcatcgtg
ggaattcacatgcacacaggatctgatattcttgatatcgaagtattcttgtatgctgct
gaaattttgtttgatactgcaaaacactttaaagatcttgagttccttgattttggaagc
ggattcaaagtgccttacaaaaaagacgatatcgaaaccgatattgaagaattaggtaaa
aaattatcaaaaagattcaactctttctgtgctgaatacggtagagatttaacgttaatt
ttcgaaccgggaaaattcctggtgagtgaagcaggtttcttcttagccaaagtaaacgta
gtaaaacaaacaacttctacagtattcgcaggagtcgacagtggtttcaaccacttaatt
cgtcctatgttttacggttcatcacatcatatcgaaaatatctcgaacccaaaaggaaaa
gaacgtttttactcggtagtaggatacatttgcgaaactgatacttttgccaacaaccgc
agaatctcggaaattacggaaggtgatattttagcattcagaaatgccggagcttactgt
ttttctatggcatcaaattacaattcaagatacaaaccagccgaagttttatggatgaac
ggaaaaggaatcttaatccgtcaacacgaaacattcgaggatttgcttaaaaatcaaatt
ccgttgccacaagaagttgctgcaacagtttaa
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