Flavobacterium collinsii: TRV642_2422
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Entry
TRV642_2422 CDS
T08703
Symbol
secD-secF
Name
(GenBank) Protein-export membrane protein SecF / Protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
fcs
Flavobacterium collinsii
Pathway
fcs02024
Quorum sensing
fcs03060
Protein export
fcs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
TRV642_2422 (secD-secF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
TRV642_2422 (secD-secF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TRV642_2422 (secD-secF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fcs02044
]
TRV642_2422 (secD-secF)
Secretion system [BR:
fcs02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
TRV642_2422 (secD-secF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
Cytochrom_C_2
SelR
Motif
Other DBs
NCBI-ProteinID:
CAI2767297
UniProt:
A0A9W4TIB7
LinkDB
All DBs
Position
TRV642:2769224..2772199
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AA seq
991 aa
AA seq
DB search
MQNKGLIKFFAILFALVSIYQLSFTFVANSVKSEAKAFAGDNPDKELKYLDSIGKEKVLN
LGFTDFTYNEVKNKQLNKGLDLEGGINVILQISVKDVLKGLANNSKNPVFNKSLADATAN
LEGNKTYLNKFFEAFEANSKGTTKLASPDIFANRSLQGEGGVDFQMSDAQVQKVIKKKVD
ESIESAYKVLRERIDKFGVTQPNIQKLGETGRILVELPGAKDVDRIKKLLGGKAQLEFWE
TFKIEEIGNFLVATNEALKKTEIKKTETKAVVKDSLNALLTDNAKDSVDTKKGNNPLFDK
MLGQGGGPVLGYFAPKDTATVNNYFKRADIRILLGADQHNAKFVWSKPTTIKDAKGKDIE
AVELYALKGNRDNVPAMSGGVVTDAKDTFDQLGKPAVSMQMNSQGAKVWEELTGRAFSQK
GYIAIVLDNIVYSAPGVTSGPIAGGRSEITGSFDVAETKDLANVLNAGKLPASADIIQST
VVGPSLGQAAIDAGTISSVLGFLLVCLWMVFYYGKAGWYANLALLLNLLFLFGIMASFGF
VLTLPGIAGIVLTLGTAVDANIIIFERAKEELREGKSLSEAVVASYGWHGAMRSIIDANV
THVLTGAILFIFGTGPIKGFALTLLIGIVTSLFTSIFIARIFIDRNIAGKGDLTFSTNIT
KNWFTNFHFDFIKIKKFTYIFSSIVVVVSLVSIFFVNGLDEGVDFVGGRTFQVKFEKPID
ATVVSDELSASFGTPVEAKILGDDDQLKITTKYKIKEDGVAVDEEVNQILYKSLAKYFPN
TSYEKFINSFDGKKIGVVQQSKVGASISEDIKTNSYWAVLGAMAVIFLYLMISFRKWQYS
LGAIAAVAHDVIFVLGIYSLCYKFMPFHMEMDQHFIAAILTVIGYSMNDTVIVFDRIREF
IIGNRKGSFEDIVNASINTTLSRTLNTSLMMIIVLLTMFIFGGESIRGFIFAMLIGIVVG
TYSSLFIATPVLVDTISSDDKHTIEDKHNHA
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgcagaataaaggacttattaaatttttcgcaattctatttgcattggtaagtatttac
caactctcgttcacttttgtggccaatagtgtcaaaagtgaagctaaagcttttgcagga
gataatcctgataaagaattaaaatacttagattctattggaaaagaaaaagtgttaaac
cttggttttactgattttacttataacgaagtaaaaaacaaacaacttaataaaggtctt
gacttagaaggaggaatcaacgtgattcttcaaatttctgttaaagacgttttgaaagga
ttagcaaacaattctaaaaatccggtatttaataaatcattagctgatgcaactgcaaat
ttagaaggaaacaaaacctatttaaataagttcttcgaagcttttgaggctaactcaaaa
gggacaacgaaattagcttcacctgatatttttgcaaacagaagtttacaaggagaaggt
ggtgtagattttcaaatgtctgatgcgcaagtacaaaaagtaattaagaaaaaagtagat
gagtctatcgaaagtgcttacaaagtacttagagagcgtatcgacaaatttggtgtaact
cagccaaacatacaaaaattaggagaaacaggaagaatcttagtagaacttccaggtgct
aaggatgtagatagaattaaaaaattattaggaggaaaagctcaattagagttttgggag
acttttaaaattgaagaaatcggtaactttttagtagcgactaacgaagctctgaaaaag
actgaaatcaaaaaaacagagactaaagctgttgttaaagattcattaaatgcattatta
acggataacgctaaagattcagtagatactaaaaaaggaaacaacccattatttgacaaa
atgttaggtcagggtggtggaccagttttaggatactttgctcctaaagatacagctact
gtaaacaattattttaaaagagctgacatcagaattttattgggtgctgaccaacacaat
gcaaaatttgtgtggagtaaacctactactattaaagatgcaaaaggaaaagatattgaa
gcagttgaattatatgctttaaaaggaaacagagacaatgttcctgcaatgagcggtggt
gttgttacagatgcaaaagatacatttgaccaattaggaaaaccagctgtttctatgcaa
atgaacagccagggagctaaagtttgggaagaattaacaggaagagcattctctcaaaaa
ggatatattgctattgttttggataatattgtttactctgcgccaggtgttacaagtgga
ccaattgcaggaggaagatctgaaattacaggttcttttgatgtagctgaaactaaagat
ttagctaacgtattaaacgcaggtaaattaccagcttctgcagatattattcagtcaaca
gttgtaggaccatctttaggtcaggctgcaattgatgcaggtacaatttcttctgtatta
ggatttttattagtttgtttatggatggtgttctattatggtaaagcaggttggtatgct
aaccttgccttattattgaacttacttttcttgtttggaattatggcaagttttggtttt
gtattaacattgccaggtattgcaggtatcgtattaacattaggtacggcggtagatgcg
aacatcattatatttgaaagagctaaagaagaattacgtgaaggaaaatcattgtcagaa
gcagttgtagcttcttacggatggcatggagcaatgcgttctattatcgacgcaaacgtt
actcacgttttaactggtgcaatcttattcatttttggtacagggccaattaaaggtttt
gctttaacattattgattggtatcgtaacttcattgtttacttcaatctttattgctaga
atttttattgacagaaacattgcaggaaaaggagatttaacattctctacaaacattact
aaaaactggtttacaaacttccactttgactttattaagattaagaaatttacttacatc
ttctcttcaattgtagttgtagtgagtttagtttctatcttcttcgtaaacggattagat
gaaggtgttgattttgttggaggaagaacattccaagtaaaatttgaaaaaccaattgat
gctactgtagtatcagatgaattatctgcttcttttggtactcctgttgaggctaaaatt
ttaggtgatgatgatcagttgaaaatcacaactaaatataaaattaaagaagatggtgta
gctgttgatgaagaagtgaatcaaattttatacaagtcgttagcgaaatatttccctaac
acttcttatgaaaaattcatcaactcatttgatggtaagaaaattggagttgtacagcaa
tctaaagttggagcttctatttctgaagatattaaaacaaactcttactgggctgtatta
ggtgcaatggcagttattttcttatacttaatgatctctttccgtaaatggcaatattca
ttaggtgcaattgcagcggtagcacacgacgttatctttgtattaggaatctactcttta
tgttataaattcatgcctttccacatggaaatggatcagcactttattgcggctatcctt
actgtaattggttactctatgaatgatactgtaattgtatttgatagaattagagagttc
atcatcggaaaccgtaaaggaagttttgaagatatcgtaaatgcttctattaatactaca
ttatcaagaacgttgaatacgtcattaatgatgatcattgtattgttaacgatgtttatc
tttggtggagaatctatcagagggtttatctttgcaatgttgattggtattgtggtagga
acttattcatcattatttattgctacaccagtattggttgatacaatttcaagtgatgat
aaacacacaatcgaagacaaacacaatcatgcataa
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