Flavobacterium collinsii: TRV642_2496
Help
Entry
TRV642_2496 CDS
T08703
Name
(GenBank) YkuD domain-containing protein
KO
K21470
L,D-transpeptidase YcbB
Organism
fcs
Flavobacterium collinsii
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fcs01002
]
TRV642_2496
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fcs01011
]
TRV642_2496
Peptidases and inhibitors [BR:
fcs01002
]
Cysteine peptidases
Family C82
TRV642_2496
Peptidoglycan biosynthesis and degradation proteins [BR:
fcs01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
TRV642_2496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
CAI2767365
UniProt:
A0A9W4TG32
LinkDB
All DBs
Position
TRV642:complement(2852015..2853589)
Genome browser
AA seq
524 aa
AA seq
DB search
MKTLYPLSLIIVLSFFVSSFAKTDHKNVFYKKTSTVAPVYKNSGSDNVNEISNDFFKRYS
DLKKYKSDVMSLYKNRTPGTIWFDEDAINEFGSALYQKTKKTNDLVVPYQKEIDALFSSS
ATKLSKTDADMLLSSLYIAYAKKSNADAGKKMSYDAMLKDFLNYSTIEEATTSTTENIKV
TYDQYYKLQDVLKKYKKLDRSNKWKPIVPEETPYKDLRPDAVSNTIAQVRTRLYLLGDLK
KDSKSNVYDRELMDAVMKYKVRNGFKPNYILAEEHIKEMNVTLADKMETLKLNMERCRII
SDQMAGCDEYVLVNVPSYELIYVKNGKVQLSSSVFVGAPLTKTTIFNGEIEKIVFSPYWT
VPQSIVNNELKSKIAEDKNYLAKHNMEIVNGQVRQKPGPENSLGLVKFMFPNPDDIYMHD
TPSKTLFDFEKRTFSHGCINIKMAKELAAAMLKDYPEWTPDKIDKAMAGKTENSFKLTKK
VPIYITYFTSLVNENGEIGFFQDVYERDGELNKTVSPQTGVVSK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacattatatccactcagcctaattatagttctaagtttttttgtttcgtctttt
gccaaaactgatcataagaacgttttttataaaaaaacttcaactgtcgcgcccgtttac
aagaattcaggttctgataatgtaaacgaaatttcaaatgacttctttaaaagatattct
gatttgaaaaaatataagtctgacgtcatgtcattatacaaaaacagaactccgggaact
atttggtttgatgaagatgccatcaatgagtttggttctgcattatatcaaaaaactaaa
aaaacgaatgatttggttgttccttatcaaaaagaaatcgatgctcttttttcttcttca
gcaacaaagctgtctaaaacagatgcggatatgcttttgagttctctatatattgcttac
gccaaaaaaagtaatgcagatgccggaaaaaaaatgtcgtatgatgctatgctgaaagat
tttttaaattacagtacgatcgaagaagccactacttcgaccactgaaaatattaaagta
acctatgatcaatattataaactacaggacgttctgaaaaaatataaaaaactagaccgt
tctaataaatggaagcctattgttccggaagaaacaccttataaagatttacgtccggat
gctgtttcaaatactatcgcccaagtccgaacccgtttatacttattgggagatttaaaa
aaggattctaaaagtaacgtttacgaccgtgaattaatggatgcggtaatgaaatataaa
gttcgtaacggtttcaaacctaactatattttagcagaagaacatattaaagaaatgaat
gttactcttgctgataaaatggagaccctaaaacttaacatggagagatgtcgcattatt
tcggatcaaatggccggttgcgatgagtatgttttagtcaacgttccctcatatgaattg
atttatgtaaaaaatgggaaggtgcaactgtcttcgagtgtctttgttggagcaccatta
acaaaaacaaccatttttaatggcgaaattgagaaaatcgtttttagcccttactggacc
gttccgcaaagtattgtaaacaatgagttgaaaagtaaaatcgctgaggataaaaattat
cttgccaaacataatatggaaatagtaaatggtcaggtaagacaaaaaccgggtcctgaa
aactcattaggattagtaaaatttatgttcccgaaccctgatgacatctatatgcatgat
actccatctaaaactttattcgattttgaaaaaagaacgttcagccatggttgtataaac
ataaaaatggctaaagaattagctgctgccatgcttaaagattatcctgaatggactccc
gataaaatagataaagctatggcgggtaaaacagaaaacagttttaaactaactaaaaaa
gtacctatttatattacatattttacttcgctagtcaatgaaaatggagaaattggtttc
tttcaggatgtttatgagcgagatggtgaattaaacaaaacggtttctcctcagacggga
gtagtatctaaataa
DBGET
integrated database retrieval system
