Flavobacterium collinsii: TRV642_2688
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Entry
TRV642_2688 CDS
T08703
Name
(GenBank) Uncharacterized RNA methyltransferase BT_0643
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fcs
Flavobacterium collinsii
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcs03009
]
TRV642_2688
Enzymes [BR:
fcs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
TRV642_2688
Ribosome biogenesis [BR:
fcs03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TRV642_2688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Cons_hypoth95
Methyltransf_25
MTS
TRAM
TRM5-TYW2_MTfase
Methyltransf_15
PrmA
Alginate_lyase2
PCMT
FtsJ
N6_N4_Mtase
Methyltransf_11
UPF0020
Motif
Other DBs
NCBI-ProteinID:
CAI2767542
UniProt:
A0A9W4X6T2
LinkDB
All DBs
Position
TRV642:complement(3061661..3063073)
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AA seq
470 aa
AA seq
DB search
MGRKNTDKVVFHQIQVLDAGAKGVSVAKAPDGKVIFIPNVVPGDVVDVQTFKKRKAYYEG
KAVKFHELSEHRIEPICDHFGVCGGCKWQNMKYSQQLYYKQNEVKNHLQRIGKVELPEFE
NILGSEKQFFYRNKMEFSFSNSRWLTEKEIESTEDLGNRNALGFHIPKMWDKILDIQKCH
LQEDPSNAIRNEIRAFANDHNLAFFNPREHSGLLRTVMIRTASTGEIMVLIQFFENDPKN
RELILDHLYKKFPQITSLQYVVNSKQNDTIYDQDIKLYKGRDYILEEMEGLKFSINAKSF
YQTNSDQAYELYKITRDFAGLTGNETVYDLYTGTGTIAQFVSKKAKKVIGVESVPEAILD
AKANAERNNITNCEFFVGDMKVVFNEAFIAQHGKPDVIITDPPRDGMHAAVIDQILKIAP
EKVVYVSCNSATQARDLALMDEKYKVTRVRPVDMFPQTHHVENVVLLELR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaaaaatacagacaaagttgtctttcatcaaattcaggttcttgatgcagga
gcaaaaggagtatcagtagcaaaagctcctgacggaaaagtaatctttattccgaatgtc
gttcctggcgatgtagtagacgtacaaacctttaagaaaagaaaagcctactatgaaggc
aaagccgtaaaatttcacgaattatcagaacatcgtattgagccaatatgcgatcatttt
ggggtttgtggaggatgtaaatggcaaaatatgaaatacagtcaacagctgtattacaaa
caaaacgaagtaaaaaatcatttgcagcgcatcgggaaagtagaacttcctgaattcgaa
aacatcttaggttctgaaaaacagtttttctacagaaacaagatggaattttcattttct
aacagccgttggctaaccgaaaaggaaattgaaagtacagaagacttaggaaaccgaaat
gccttagggtttcatattccgaaaatgtgggacaaaattctggacattcaaaaatgtcat
ttgcaggaagatccttcaaatgccatcagaaatgaaatcagggcttttgcaaacgatcat
aatctggccttctttaatccgagagaacattccggtttactgagaacagtaatgattcgt
acggcatctactggtgaaatcatggttttgattcagttttttgaaaacgatcctaaaaac
cgtgaattgattttagatcatctttacaaaaagtttccgcagattacttcattgcaatat
gtggtaaactccaaacaaaacgatacgatttacgatcaggatattaaattgtacaaagga
agagattatatactggaagaaatggaaggtttaaaattcagcatcaatgctaaatctttc
taccagaccaattcagatcaggcttatgaattatacaagataacccgtgattttgccgga
cttactggtaacgaaacggtttatgatttgtataccggaactggaactattgcacagttt
gtttctaaaaaagccaaaaaagtaattggtgtcgaaagtgttcccgaagcaattttagat
gcgaaagccaatgcagaacgcaataatattaccaattgtgagttttttgtaggtgatatg
aaagttgttttcaacgaagctttcattgctcagcacggaaaaccggatgttattatcaca
gatccaccaagagatggaatgcatgccgcggttattgatcaaattttgaagattgctccc
gaaaaagtagtttatgtaagttgtaattcagcaactcaggcacgtgatttggctttaatg
gatgaaaaatacaaggtaacgcgcgttagacctgttgatatgtttccacaaacgcatcat
gtcgaaaatgttgtacttttagaacttcgataa
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