Flavobacterium collinsii: TRV642_2945
Help
Entry
TRV642_2945 CDS
T08703
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs03030
DNA replication
fcs03430
Mismatch repair
fcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRV642_2945
03430 Mismatch repair
TRV642_2945
03440 Homologous recombination
TRV642_2945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcs03032
]
TRV642_2945
03400 DNA repair and recombination proteins [BR:
fcs03400
]
TRV642_2945
Enzymes [BR:
fcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TRV642_2945
DNA replication proteins [BR:
fcs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TRV642_2945
DNA repair and recombination proteins [BR:
fcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TRV642_2945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
DEDDh_C
RNase_H_2
HK_sensor_dom_bact
DNA_pol_A_exo1
T5orf172
Motif
Other DBs
NCBI-ProteinID:
CAI2767784
UniProt:
A0A9W4XAI8
LinkDB
All DBs
Position
TRV642:complement(3339442..3340803)
Genome browser
AA seq
453 aa
AA seq
DB search
MYAILDIETTGGQFNEEGITEIAIYKFDGHEVIDQFISLVNPEIPIQPFVVKLTGINNAM
LRSAPKFFEVAKRIIEITTDCIIVAHNASFDYRILRTEFRRLGYNFEAKTLCTVELAKKL
IPDQPSYSLGKLVRALGIPMADRHRASGDAMATTKLFKMLLEKDLEKTIVKDFIKLEVEK
GIAPKFLDILAQMPAKTGIYYIYNEGGTLIYIGKSQNIKKRVNQHFTGITTKSKKIQSEV
FTITYDETGSELIALLKESEEIKINRPRYNRSQRKTIFQYALYAEKDTNGYINLKLEKAD
GRKKEITSFGTLQEGKNALFRFTSKYHLCQKLTGLYQTKKECFQYKIKECDGACIEEVTP
EIYNGRVQQFIAENSFENKSMILLDRGRNVNERSAILIENGLYKGYAFYDLNYQITNIEI
LKNILIPMQHNRDVKNIIQSYLRKSKSIKVLHF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgcaatactagacatagaaaccactggaggtcagtttaatgaggaaggaattacc
gaaatcgccatttataaatttgatggccatgaggtaattgaccaattcattagtctggtt
aaccctgaaattccgattcagcccttcgtggtgaaattaaccggaatcaataatgctatg
ttgcgttctgctccgaaattttttgaagttgcaaaacgaattatcgaaatcactacagac
tgcattattgtagcacacaatgcctcttttgattaccgaattctacgtaccgaattcaga
cgactgggctacaatttcgaagccaaaacactatgtacagttgaacttgctaagaaatta
attccggatcaaccttcttatagcttaggaaaattggtgcgcgcacttgggattccaatg
gcagacagacatcgtgccagtggagacgcaatggcaacaaccaagctatttaagatgctt
ctagaaaaagatctcgaaaaaaccattgtaaaagattttataaaactggaggtagaaaaa
ggaattgctccaaagttcctggacatacttgctcagatgccagcaaaaactggtatctat
tatatttacaatgaaggcggaacccttatctatattggaaaaagccaaaatataaagaaa
agagtcaatcagcattttacaggaattactaccaaaagtaaaaaaattcagtccgaagtt
ttcaccataacttatgatgaaaccggaagcgaattaattgctcttttgaaagaaagtgaa
gaaataaaaataaatcgcccaagatacaatcgttcacaacgaaaaaccatctttcaatat
gctttgtatgcagagaaagacactaatggctatatcaatttaaagcttgaaaaagcagac
ggtcgtaaaaaagaaattacctcatttggtactttgcaggaaggtaaaaatgctctgttc
agatttacatcaaaataccatttatgccaaaagctaacgggactttatcaaaccaaaaaa
gagtgttttcaatataaaatcaaagaatgtgacggtgcctgtattgaggaagtaacacct
gaaatttacaatggccgtgtacaacaatttatcgcagaaaacagtttcgaaaataaaagc
atgattttgctggacagaggccgaaatgtcaacgaaagaagcgccattttaattgaaaat
ggtctttataaaggatatgccttttacgatctaaattatcagattacaaacatcgagatt
ctaaaaaatattttaattccgatgcagcataatcgcgatgtgaaaaacattattcaaagt
tacctccgaaagagtaaatcaataaaggttcttcatttttaa
DBGET
integrated database retrieval system
