Flavobacterium collinsii: TRV642_3185
Help
Entry
TRV642_3185 CDS
T08703
Name
(GenBank) Winged helix-turn-helix transcriptional regulator
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
fcs
Flavobacterium collinsii
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fcs03000
]
TRV642_3185
Transcription factors [BR:
fcs03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
TRV642_3185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
MarR_2
MarR
NirdL-like_HTH
HTH_11
HTH_20
HTH_34
Fe_dep_repress
Mga
HTH_41
GerE
HTH_5
HTH_IclR
TrmB
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
CAI2767999
UniProt:
A0A9W4XF97
LinkDB
All DBs
Position
TRV642:3612494..3612973
Genome browser
AA seq
159 aa
AA seq
DB search
MSKFRLDEVDHQILDMLIDNTRVPFTDIAKKLLISAGTVHVRVKKMEDAGIIMGSSLALD
YDKLGYSFIAYVGVFLNNTSQTKFVLERINQIPFVTVASVTTGKFNIFCKIRAKDTKHAK
EVIFMIDDIEGVYRTETMISLEESINDKKRLMHTIFKNM
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatttcgtttagatgaagtagatcaccagattttagatatgttaatagacaat
acgagagttccgtttactgacattgctaaaaaactattgatatctgctggtacagtgcat
gttagagtaaaaaagatggaggacgcagggataataatgggatcttcattggccttagat
tacgataagttagggtattcatttattgcttatgtaggtgtcttccttaacaatacgtct
caaacaaaatttgtattagagcgaataaatcaaattccgttcgtaacagtagcttctgta
acaacaggaaaattcaatattttttgcaaaatcagagcaaaagatactaaacatgcaaaa
gaagtaattttcatgatcgatgatatcgaaggtgtttacagaactgaaacaatgatttca
ttagaagaaagtataaacgataagaagcgtttgatgcatactatttttaaaaatatgtaa
DBGET
integrated database retrieval system
