Flavobacterium collinsii: TRV642_4350
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Entry
TRV642_4350 CDS
T08703
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fcs
Flavobacterium collinsii
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcs03016
]
TRV642_4350 (truA)
Enzymes [BR:
fcs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
TRV642_4350 (truA)
Transfer RNA biogenesis [BR:
fcs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TRV642_4350 (truA)
Prokaryotic type
TRV642_4350 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
PMI_typeI_hel
Motif
Other DBs
NCBI-ProteinID:
CAI2769015
UniProt:
A0A9W4TJ46
LinkDB
All DBs
Position
TRV642:5021750..5022490
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AA seq
246 aa
AA seq
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MRYFIQFAYNGTHYHGWQFQPNASSVQETLNKALSILLNTPINVMGAGRTDTGVHAQEMY
GHFDVETPLEVPNLIHKLNSFLPKDIAIFNILPVHDEAHCRFDATRRTYEYHINTVKNPF
LEELSWYFNQKLDVDLMNEAAKILLLHTDFQCFSKVNTDVNTFDCTIFEAYWKQENSKLI
FTISANRFLRNMVRAIVGTLVNIGLHKISLDDLENIIASKSREKAGFSVPAHGLYLTEID
YDYLSL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
ttgagatattttattcaatttgcttataacggaacacattatcatggctggcaatttcag
cccaacgcatcttctgttcaggaaactttaaacaaagcactttctattttattgaacact
cccataaatgtaatgggtgccggacgaacggataccggagttcatgcgcaggaaatgtat
ggtcattttgatgttgaaaccccgttggaagttccaaatttgattcacaagctcaactcg
tttttaccaaaagacattgctatttttaatattcttccggttcacgatgaggcccattgc
cgatttgatgcaaccagaagaacctacgaataccacatcaacactgttaaaaatccgttt
ttagaagaattgagttggtactttaatcaaaaattagatgtagatttgatgaatgaagcc
gcgaaaattttactgctccacaccgacttccagtgtttttcgaaagtaaatacagacgtc
aatacttttgattgcacgatttttgaggcatactggaaacaggaaaacagtaagctgatt
tttacgatctcggccaatcgttttcttcgcaatatggtgcgggcaattgttggaacatta
gtaaatattggtttgcataaaatttctctggatgatcttgaaaacattatcgccagtaaa
agcagagaaaaagccggattttcggtaccggcacacggattatatttaaccgaaattgat
tacgattatttatcgctgtag
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