Flavobacterium collinsii: TRV642_4453
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Entry
TRV642_4453 CDS
T08703
Name
(GenBank) Hydrogen peroxide-inducible genes activator
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
fcs
Flavobacterium collinsii
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fcs03000
]
TRV642_4453
Transcription factors [BR:
fcs03000
]
Prokaryotic type
Helix-turn-helix
LysR family
TRV642_4453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
SBP_bac_3
HTH_30
Motif
Other DBs
NCBI-ProteinID:
CAI2769109
LinkDB
All DBs
Position
TRV642:5141864..5142805
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AA seq
313 aa
AA seq
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MTITQLQYVLAVAEHKNFTLAAEKCFVTQPTLSMQIQKIEEELNILIFDRSKKPIQLTDI
GQKIVNQAKNIVNEADRIKDIVEQQKGFIGGEFRLGIIPTIMPTLLPMFLNNFIKKYPKV
KLLIEELNTDEIILKLKNGHLDAAIAATPLEDEKIKEIVLYFEPFVAYIPEHHASFQKEE
IEVADLNINEILLLQDGHCFRDGILNLCKNASDLDQNNFQIQSGSFETLIKLADEGLGTT
LLPYLHTLDLKDSDKQKLRNFKEPKPAREVSLIYPKSELKMQIIDALRSTIAGVVKGAIV
FQNVQIISPLQKK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgactataactcaattgcaatatgtgttagccgttgccgaacataaaaatttcacgctt
gctgccgaaaaatgtttcgttacccagccaacgctaagtatgcagattcagaaaatcgaa
gaagaattaaatattctgatttttgacagaagcaaaaagcctattcagcttaccgatatt
ggtcaaaaaattgtaaaccaagccaagaatattgtaaacgaagcggatcgtattaaagac
attgtagaacaacaaaaaggcttcattggaggagaattccgtttaggaattatcccgacc
attatgcccacacttttaccaatgtttttaaacaacttcatcaagaaatatccaaaagtt
aaacttctaattgaagagcttaatacagacgagatcattctgaaattaaaaaatggccat
cttgatgctgctattgctgctactccgcttgaagatgaaaaaataaaagaaattgtattg
tattttgagccttttgtcgcttatatcccggaacatcacgccagttttcaaaaagaagaa
attgaagttgccgatttaaacatcaacgaaatcctgttacttcaggacggacattgtttt
agagacgggattttaaatttgtgtaaaaatgccagtgacctcgatcagaataattttcag
attcaaagtggtagctttgaaaccctaattaaactagccgacgaaggtttgggtacaaca
ctacttccgtacttgcacaccttagacttaaaagattccgacaaacagaagctacgcaac
tttaaggaaccaaaaccggctcgtgaggtaagtttgatttacccgaagagcgaattaaaa
atgcaaatcattgacgccctcagatctacaattgccggagtggttaaaggagcaattgtt
tttcagaacgttcagatcataagtccgctacaaaagaaataa
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