Flavobacterium collinsii: TRV642_4705
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Entry
TRV642_4705 CDS
T08703
Name
(GenBank) YkuD domain-containing protein
KO
K21470
L,D-transpeptidase YcbB
Organism
fcs
Flavobacterium collinsii
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fcs01002
]
TRV642_4705
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fcs01011
]
TRV642_4705
Peptidases and inhibitors [BR:
fcs01002
]
Cysteine peptidases
Family C82
TRV642_4705
Peptidoglycan biosynthesis and degradation proteins [BR:
fcs01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
TRV642_4705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
CAI2769331
UniProt:
A0A9W4TJR9
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All DBs
Position
TRV642:complement(5434871..5436451)
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AA seq
526 aa
AA seq
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MKFLSPLIAVVLLFSVVSCNKKSEVKGEESKKATQHIVPELKIKIDSSGIVGFYQAYPNL
IKFQEDVLALYKKHNSTQLWLDNKGVVEFGNLLFNKYKGLDQEGLKANFPYKEKISPVFE
HTADNKLSKVDTDLMITNLYFYYVKKVSGVDEKTTKSLEWLLPRKKVNYQVFSDSIYKKA
TISDDRKSKMFSQYYKLRDALHQYREIEKKGGWKTIETEEGFKSFKTGDSVAAIGQIRAR
LYATGDLKENNNSNICDSVLIAAVKNFESHHGLTPKNIILPEHIVELNVPVSDRIKTIIV
NMERCRWIDPELEKGQEYIEVNIPEFRLYLIRNGEIVFVSPVVVGKAMTQTVIFSGMMNN
IVFSPYWNVPTSIINKEIKPGMAKNKNYLREKNLEWNNGAVRQLPGKNNSLGLVKFLFPN
SNNIYLHDTPAKSLFERENRAFSHGCVRVGKPRELAIELLKQDPSWTPARIDKAMHAGKE
NWYTLKRKVPVYIGYFTAWVDREGHLNFYKDIYQRDESLIKLLTEE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttttgtccccccttattgctgttgtccttctttttagcgttgtttcctgtaat
aagaaatcggaagtaaagggtgaagaatcgaaaaaagcaacacagcacatcgtgccggaa
cttaaaattaaaattgacagctcaggtattgtaggtttttatcaggcctaccccaatttg
attaagtttcaggaggacgttctggcgttgtacaaaaaacacaattctactcagttatgg
ctcgacaataaaggagttgtagaatttggaaatttattattcaacaaatacaaaggactg
gatcaggaaggactgaaagctaattttccttataaagaaaagatcagtccagtatttgag
cacactgctgacaataaactatcgaaagtcgataccgatttgatgattactaatttgtat
ttctactacgtcaaaaaagtatccggagtagacgagaagaccacaaagtccctggaatgg
cttttaccgcgaaaaaaagtaaactatcaggtgttttctgattcaatttataaaaaggcc
acgattagcgatgataggaaaagcaaaatgttcagtcagtactataaacttcgcgatgca
cttcatcaatatagagaaatagagaaaaaaggaggatggaaaaccattgaaacagaagaa
ggttttaaaagttttaaaacaggtgactctgtagccgctattggacagataagggcgaga
ctttatgcaacaggtgatttaaaggaaaacaataacagtaatatctgtgattccgtttta
attgcagcggttaagaattttgaatcacatcatggcctaacacctaaaaatataatcctg
ccagagcatattgtcgaactgaatgtgcctgtttctgatagaatcaaaacgattattgtc
aatatggaacgctgtcgatggatcgatccagaacttgaaaaaggacaagaatatatagaa
gttaatattcctgagttcagattgtatttaatccgaaatggggaaattgtttttgtgtcg
ccggtagtggtgggcaaagcgatgacacaaaccgttatttttagtggaatgatgaacaat
attgtttttagtccgtattggaatgtacccactagtataatcaataaagagatcaaaccc
ggaatggccaagaacaagaattatctgagagagaaaaatcttgaatggaataacggtgcg
gttcgtcagttacccggaaagaataattcgctgggtttggtgaagtttctgtttccaaac
tcaaataacatttacctgcatgatacacctgccaaaagtttgttcgaaagagaaaataga
gcttttagtcacggttgcgtacgtgtagggaagcctagagaacttgcaatcgaactctta
aagcaagatccttcatggacccctgcacgaattgataaagccatgcatgccggtaaagaa
aactggtatactttaaaaagaaaggtgcctgtttatattggctactttaccgcctgggta
gatagggaaggacacttgaatttttataaagacatttatcagagagacgaaagtctgata
aaactgctgacagaagaataa
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