Flavobacterium collinsii: TRV642_4731
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Entry
TRV642_4731 CDS
T08703
Symbol
dinG
Name
(GenBank) 3'-5' exonuclease DinG
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs03030
DNA replication
fcs03430
Mismatch repair
fcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRV642_4731 (dinG)
03430 Mismatch repair
TRV642_4731 (dinG)
03440 Homologous recombination
TRV642_4731 (dinG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcs03032
]
TRV642_4731 (dinG)
03400 DNA repair and recombination proteins [BR:
fcs03400
]
TRV642_4731 (dinG)
Enzymes [BR:
fcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TRV642_4731 (dinG)
DNA replication proteins [BR:
fcs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TRV642_4731 (dinG)
DNA repair and recombination proteins [BR:
fcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TRV642_4731 (dinG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
TMEM95
Motif
Other DBs
NCBI-ProteinID:
CAI2769357
UniProt:
A0A9W4XBX5
LinkDB
All DBs
Position
TRV642:complement(5464013..5464783)
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AA seq
256 aa
AA seq
DB search
MELKLNKPICFFDLETTGIDIGKDRIVEISIFKVFPNGNKESKTWLVNPTIPIPPQTTAV
HGITDEKVANEPTFAELAPQVYNMIKDSDLGGFNSDRFDIPLLAEELLRAGVDFDMKNKV
SVDVQTIFHKMEERTLSAALKFYCGKSLENAHSAEADTMATYEILKAQLDRYPELENDMK
SLSEFTTRKKIADFAGMIAFDKDNEEIFTFGKHKGAKVDKILESEPGYFSWIQNADFPLY
TKKVLTAIKLRKLNTK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggaactcaaactcaacaaaccaatttgcttttttgatcttgaaacaaccggaattgat
atcggtaaagatcgaattgtagaaatttcgatattcaaagtttttccaaacggaaataaa
gaaagtaaaacctggttggtgaatcctacgattccaattccgccacaaacaactgctgtt
catggtatcacggatgaaaaagtggccaatgagcctacttttgcagaattggcaccacag
gtttataatatgattaaagacagtgatttaggcggttttaattcagatcgttttgatatt
ccgttgttagcggaagaattgctgcgtgccggagttgattttgatatgaagaacaaagtt
tcggtagatgtgcaaacaatctttcataaaatggaagaacgtactctaagtgcggcacta
aaattctattgcggaaaaagtctggagaacgcgcattcagcagaagcagatacaatggcg
acctacgagatcttaaaggcgcaattggaccgttacccggaattggaaaatgatatgaaa
tcattgtctgaatttacaacacgtaaaaaaatcgctgatttcgccggaatgattgctttt
gataaagataacgaagagatttttacctttggaaagcataaaggagctaaagtggataag
attttagaaagtgagccaggctattttagctggatccaaaatgctgattttcctttgtat
accaaaaaagtcttaacggcaattaaattaagaaagttaaacacaaaataa
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