KEGG   Flavobacterium collinsii: TRV642_4816
Entry
TRV642_4816       CDS       T08703                                 
Symbol
ribD
Name
(GenBank) Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
fcs  Flavobacterium collinsii
Pathway
fcs00740  Riboflavin metabolism
fcs01100  Metabolic pathways
fcs01110  Biosynthesis of secondary metabolites
fcs01240  Biosynthesis of cofactors
fcs02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:fcs00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    TRV642_4816 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TRV642_4816 (ribD)
Enzymes [BR:fcs01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     TRV642_4816 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     TRV642_4816 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD APOBEC3 APOBEC_N SNAD4
Other DBs
NCBI-ProteinID: CAI2769439
UniProt: A0A9W4TNS5
LinkDB
Position
TRV642:5551592..5552641
AA seq 349 aa
MNIHEKYIKRCIELAQNGLGTTYPNPMVGSIIVYDNQIIGEGWHKKAGEPHAEVNAVRSV
KDKSLLSKATIYVSLEPCSHFGKTPPCSDLIIEYKIPHVVVGTVDPNEKVAGNGIKKLIA
AGINVTVGVLEKECYELNKRFFTFHQKKRPYIILKWAESQDGFLSPEKQESPERKPIWIT
NPYSRQLVHKWRSEEQAILVGTQTVIDDNPKLNTRNWSGNNPVRVILDQHNRISKESFVF
DDSVKTIVFTKSETGFSTENTTFTLIDFSSSILPQILAVLHQNQIQSVIIEGGAQTLQSF
IDQNIWDEARIFIGKAIFKNGTKAPLIQKENLTKINILSDELLNIRNHD
NT seq 1050 nt   +upstreamnt  +downstreamnt
gtgaatatacatgaaaaatacataaaacgttgcatcgagctggctcaaaatggtttgggc
accacatatccaaacccaatggtcggaagcataattgtttacgacaatcagattattgga
gagggctggcataaaaaagcaggagaaccgcatgcggaagtcaatgccgttcgttcggta
aaagacaaatcactgttaagcaaagctaccatttatgttagcttagagccttgcagccat
tttggaaaaacacctccgtgcagcgacttaattatagaatacaaaattccacatgttgtt
gtcggaactgttgatcctaatgaaaaagtggcaggaaacggcattaaaaaactaattgcc
gcaggaatcaatgttaccgttggagttttagaaaaagaatgttacgaactcaacaaacgt
ttttttacttttcatcaaaaaaagaggccttacataatattaaaatgggccgaaagtcag
gacggatttttatcccctgaaaaacaggaaagccccgagcgaaagcccatctggattacc
aatccttattccagacaattggtacacaaatggagaagtgaagagcaggcaatcctcgtt
ggaacacagacagtaattgacgacaatccgaaattaaacaccagaaattggtcaggaaat
aatccggtcagagtcattctagaccaacacaatcgcatttcaaaagagagttttgttttt
gatgacagcgtaaaaaccattgtatttacaaaatccgaaaccggcttttcgacagaaaac
actacctttactctaatcgattttagcagcagtattctaccacagattttagccgtttta
catcaaaatcaaattcaatctgttattatcgaaggaggtgctcaaactttacaatctttt
atcgatcagaatatttgggacgaagcccggattttcatcggaaaagccattttcaaaaac
ggaactaaagcaccgcttattcaaaaagaaaacctaacaaaaattaatattctcagcgac
gaattattaaatattagaaatcatgattga

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