Fundicoccus culcitae: NRE15_02935
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Entry
NRE15_02935 CDS
T09401
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fct
Fundicoccus culcitae
Brite
KEGG Orthology (KO) [BR:
fct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fct03016
]
NRE15_02935 (truB)
Enzymes [BR:
fct01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NRE15_02935 (truB)
Transfer RNA biogenesis [BR:
fct03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NRE15_02935 (truB)
Prokaryotic type
NRE15_02935 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF6210
TruB_C
DUF4755
Motif
Other DBs
NCBI-ProteinID:
UUX34622
LinkDB
All DBs
Position
complement(627838..628770)
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AA seq
310 aa
AA seq
DB search
MLNGVIPIWKEKGLTSHDVVFKLRKILKQKRIGHTGTLDPQVEGVLLVCLGEGTKLVELL
MDGEKTYVGEITLGQATETEDRYGAIIATKRVQPMVEQTIIDATMEQFKGWINQIPPYYS
AVKVQGKKLYEYARAGIEVERPSRQVFIHAFERTSEINYDEQKGIQSWTFEVICGKGTYV
RTLAVDLGKQLGYPAHMSALTRKATGGFDEADAVTLGEVQQAMDENQIDRFIFPIEALLR
NFPTIDLSQEEYHDVRHGKVLAEDYFGKENLLHEITVLCYRNKVVALYQPHPNKEHLIKP
YRMFTHTINE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatggcgtaataccaatttggaaagaaaaagggttgaccagtcatgatgttgtc
tttaaattgcgcaaaatacttaagcaaaaacggattggtcatacagggacgctcgatcct
caagtcgaaggtgtcttgcttgtttgtttaggtgaaggtactaaattggttgaattactc
atggatggcgaaaaaacatatgtaggggaaattaccttaggtcaagcaactgaaactgaa
gatcggtatggagcgattattgccactaaaagagtgcaacccatggtagaacaaacaatc
attgatgcgacgatggagcaatttaagggttggattaatcaaattccgccttattattcg
gctgttaaagtacaggggaagaaactttatgagtatgctagagctggaattgaagttgaa
agacctagtcgccaagtgtttattcatgcgtttgagcggacgagcgaaatcaattatgat
gaacaaaagggtatccagtcttggacgtttgaagtgatatgtggaaaagggacctatgta
aggacattggcggttgatttaggtaagcaattaggttatcccgcacacatgtcagcctta
acgcgtaaagcaacgggaggctttgatgaagctgatgcagtgaccttaggagaagtacaa
caagctatggatgaaaatcaaattgaccgttttatttttccaattgaagcacttttgcgt
aactttccaacaattgatttatctcaagaagaatatcatgatgttcggcatggtaaagtt
ttagctgaagattattttggaaaagaaaatctacttcacgagattacagtattatgttat
cgtaataaagtagttgccttataccaaccccatccaaataaagaacacttaataaaaccc
tatcgtatgttcacccatacgataaatgaatag
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